Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CPEB3Q8NE35 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
CPEB3Q8NE35 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CPEB3Q8NE35 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CPEB3Q8NE35 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.56□□□□□ -0.24
CPEB3Q8NE35 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.56□□□□□ -0.24
CPEB3Q8NE35 BANP-201ENST00000286122 2368 ntTSL 5 BASIC13.56□□□□□ -0.24
CPEB3Q8NE35 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CPEB3Q8NE35 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.55□□□□□ -0.24
CPEB3Q8NE35 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
CPEB3Q8NE35 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
CPEB3Q8NE35 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CPEB3Q8NE35 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CPEB3Q8NE35 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CPEB3Q8NE35 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CPEB3Q8NE35 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CPEB3Q8NE35 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.55□□□□□ -0.24
CPEB3Q8NE35 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.55□□□□□ -0.24
CPEB3Q8NE35 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CPEB3Q8NE35 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CPEB3Q8NE35 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CPEB3Q8NE35 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CPEB3Q8NE35 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.55□□□□□ -0.24
CPEB3Q8NE35 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CPEB3Q8NE35 AC104581.4-201ENST00000623126 3052 ntBASIC13.55□□□□□ -0.24
CPEB3Q8NE35 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CPEB3Q8NE35 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CPEB3Q8NE35 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.55□□□□□ -0.24
CPEB3Q8NE35 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.55□□□□□ -0.24
CPEB3Q8NE35 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CPEB3Q8NE35 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CPEB3Q8NE35 AC236430.1-201ENST00000402231 743 ntBASIC13.55□□□□□ -0.24
CPEB3Q8NE35 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.55□□□□□ -0.24
CPEB3Q8NE35 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.55□□□□□ -0.24
CPEB3Q8NE35 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.55□□□□□ -0.24
CPEB3Q8NE35 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC13.55□□□□□ -0.24
CPEB3Q8NE35 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CPEB3Q8NE35 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CPEB3Q8NE35 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
CPEB3Q8NE35 AC000095.1-201ENST00000603208 874 ntBASIC13.55□□□□□ -0.24
CPEB3Q8NE35 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CPEB3Q8NE35 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CPEB3Q8NE35 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.55□□□□□ -0.24
CPEB3Q8NE35 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CPEB3Q8NE35 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CPEB3Q8NE35 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CPEB3Q8NE35 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CPEB3Q8NE35 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.55□□□□□ -0.24
CPEB3Q8NE35 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CPEB3Q8NE35 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CPEB3Q8NE35 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
CPEB3Q8NE35 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CPEB3Q8NE35 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CPEB3Q8NE35 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CPEB3Q8NE35 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CPEB3Q8NE35 KRT8P44-201ENST00000441609 1350 ntBASIC13.55□□□□□ -0.24
CPEB3Q8NE35 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC13.55□□□□□ -0.24
CPEB3Q8NE35 AC006486.2-201ENST00000624246 2199 ntBASIC13.55□□□□□ -0.24
CPEB3Q8NE35 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.55□□□□□ -0.24
CPEB3Q8NE35 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CPEB3Q8NE35 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CPEB3Q8NE35 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.55□□□□□ -0.24
CPEB3Q8NE35 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CPEB3Q8NE35 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CPEB3Q8NE35 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CPEB3Q8NE35 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CPEB3Q8NE35 CICP11-201ENST00000434745 2827 ntBASIC13.54□□□□□ -0.24
CPEB3Q8NE35 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CPEB3Q8NE35 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CPEB3Q8NE35 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CPEB3Q8NE35 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CPEB3Q8NE35 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CPEB3Q8NE35 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.54□□□□□ -0.24
CPEB3Q8NE35 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CPEB3Q8NE35 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.54□□□□□ -0.24
CPEB3Q8NE35 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.54□□□□□ -0.24
CPEB3Q8NE35 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.54□□□□□ -0.24
CPEB3Q8NE35 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CPEB3Q8NE35 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CPEB3Q8NE35 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
CPEB3Q8NE35 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CPEB3Q8NE35 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.54□□□□□ -0.24
CPEB3Q8NE35 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CPEB3Q8NE35 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CPEB3Q8NE35 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CPEB3Q8NE35 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CPEB3Q8NE35 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CPEB3Q8NE35 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CPEB3Q8NE35 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC13.54□□□□□ -0.24
CPEB3Q8NE35 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.54□□□□□ -0.24
CPEB3Q8NE35 RPL5P21-201ENST00000404620 815 ntBASIC13.54□□□□□ -0.24
CPEB3Q8NE35 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.54□□□□□ -0.24
CPEB3Q8NE35 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CPEB3Q8NE35 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.54□□□□□ -0.24
CPEB3Q8NE35 AC002472.2-201ENST00000442739 958 ntBASIC13.54□□□□□ -0.24
CPEB3Q8NE35 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.54□□□□□ -0.24
CPEB3Q8NE35 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.54□□□□□ -0.24
CPEB3Q8NE35 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.54□□□□□ -0.24
CPEB3Q8NE35 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.54□□□□□ -0.24
CPEB3Q8NE35 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms