Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF440Q8IYI8 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF440Q8IYI8 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF440Q8IYI8 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.14□□□□□ -0.15
ZNF440Q8IYI8 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
ZNF440Q8IYI8 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF440Q8IYI8 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF440Q8IYI8 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF440Q8IYI8 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF440Q8IYI8 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF440Q8IYI8 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF440Q8IYI8 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.13□□□□□ -0.15
ZNF440Q8IYI8 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF440Q8IYI8 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
ZNF440Q8IYI8 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF440Q8IYI8 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF440Q8IYI8 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF440Q8IYI8 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF440Q8IYI8 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
ZNF440Q8IYI8 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF440Q8IYI8 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF440Q8IYI8 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF440Q8IYI8 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF440Q8IYI8 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
ZNF440Q8IYI8 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
ZNF440Q8IYI8 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF440Q8IYI8 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF440Q8IYI8 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.13□□□□□ -0.15
ZNF440Q8IYI8 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.13□□□□□ -0.15
ZNF440Q8IYI8 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.13□□□□□ -0.15
ZNF440Q8IYI8 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.13□□□□□ -0.15
ZNF440Q8IYI8 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF440Q8IYI8 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.13□□□□□ -0.15
ZNF440Q8IYI8 AC004066.1-201ENST00000502488 802 ntBASIC14.13□□□□□ -0.15
ZNF440Q8IYI8 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF440Q8IYI8 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF440Q8IYI8 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.13□□□□□ -0.15
ZNF440Q8IYI8 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
ZNF440Q8IYI8 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.13□□□□□ -0.15
ZNF440Q8IYI8 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.13□□□□□ -0.15
ZNF440Q8IYI8 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF440Q8IYI8 AC106028.4-201ENST00000614509 607 ntBASIC14.13□□□□□ -0.15
ZNF440Q8IYI8 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.13□□□□□ -0.15
ZNF440Q8IYI8 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.13□□□□□ -0.15
ZNF440Q8IYI8 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.13□□□□□ -0.15
ZNF440Q8IYI8 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF440Q8IYI8 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.13□□□□□ -0.15
ZNF440Q8IYI8 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF440Q8IYI8 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF440Q8IYI8 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF440Q8IYI8 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
ZNF440Q8IYI8 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF440Q8IYI8 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.13□□□□□ -0.15
ZNF440Q8IYI8 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF440Q8IYI8 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF440Q8IYI8 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF440Q8IYI8 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.13□□□□□ -0.15
ZNF440Q8IYI8 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF440Q8IYI8 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
ZNF440Q8IYI8 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF440Q8IYI8 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF440Q8IYI8 TNRC18P2-201ENST00000417666 2714 ntBASIC14.13□□□□□ -0.15
ZNF440Q8IYI8 AC091951.1-201ENST00000512854 2465 ntBASIC14.13□□□□□ -0.15
ZNF440Q8IYI8 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF440Q8IYI8 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF440Q8IYI8 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF440Q8IYI8 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.12□□□□□ -0.15
ZNF440Q8IYI8 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF440Q8IYI8 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF440Q8IYI8 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.12□□□□□ -0.15
ZNF440Q8IYI8 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF440Q8IYI8 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.12□□□□□ -0.15
ZNF440Q8IYI8 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.12□□□□□ -0.15
ZNF440Q8IYI8 AC099063.4-201ENST00000641099 1602 ntBASIC14.12□□□□□ -0.15
ZNF440Q8IYI8 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF440Q8IYI8 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF440Q8IYI8 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF440Q8IYI8 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF440Q8IYI8 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF440Q8IYI8 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.12□□□□□ -0.15
ZNF440Q8IYI8 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF440Q8IYI8 MST1L-201ENST00000442552 2185 ntBASIC14.12□□□□□ -0.15
ZNF440Q8IYI8 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF440Q8IYI8 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF440Q8IYI8 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
ZNF440Q8IYI8 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
ZNF440Q8IYI8 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.12□□□□□ -0.15
ZNF440Q8IYI8 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.12□□□□□ -0.15
ZNF440Q8IYI8 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
ZNF440Q8IYI8 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.12□□□□□ -0.15
ZNF440Q8IYI8 RNA5SP421-201ENST00000516864 134 ntBASIC14.12□□□□□ -0.15
ZNF440Q8IYI8 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF440Q8IYI8 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF440Q8IYI8 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
ZNF440Q8IYI8 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.12□□□□□ -0.15
ZNF440Q8IYI8 RARRES2P5-201ENST00000564013 466 ntBASIC14.12□□□□□ -0.15
ZNF440Q8IYI8 SAMD11P1-201ENST00000571429 661 ntBASIC14.12□□□□□ -0.15
ZNF440Q8IYI8 AC008738.7-201ENST00000609744 511 ntBASIC14.12□□□□□ -0.15
ZNF440Q8IYI8 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF440Q8IYI8 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms