Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LYSMD3Q7Z3D4 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LYSMD3Q7Z3D4 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
LYSMD3Q7Z3D4 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.54■□□□□ 0.08
LYSMD3Q7Z3D4 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
LYSMD3Q7Z3D4 CICP11-201ENST00000434745 2827 ntBASIC15.54■□□□□ 0.08
LYSMD3Q7Z3D4 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
LYSMD3Q7Z3D4 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
LYSMD3Q7Z3D4 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LYSMD3Q7Z3D4 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LYSMD3Q7Z3D4 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
LYSMD3Q7Z3D4 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LYSMD3Q7Z3D4 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.54■□□□□ 0.08
LYSMD3Q7Z3D4 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LYSMD3Q7Z3D4 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LYSMD3Q7Z3D4 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
LYSMD3Q7Z3D4 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
LYSMD3Q7Z3D4 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LYSMD3Q7Z3D4 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LYSMD3Q7Z3D4 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LYSMD3Q7Z3D4 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.53■□□□□ 0.08
LYSMD3Q7Z3D4 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LYSMD3Q7Z3D4 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LYSMD3Q7Z3D4 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LYSMD3Q7Z3D4 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.53■□□□□ 0.08
LYSMD3Q7Z3D4 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LYSMD3Q7Z3D4 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LYSMD3Q7Z3D4 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
LYSMD3Q7Z3D4 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
LYSMD3Q7Z3D4 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LYSMD3Q7Z3D4 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.53■□□□□ 0.08
LYSMD3Q7Z3D4 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.53■□□□□ 0.08
LYSMD3Q7Z3D4 ELK1P1-201ENST00000485699 580 ntBASIC15.53■□□□□ 0.08
LYSMD3Q7Z3D4 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.53■□□□□ 0.08
LYSMD3Q7Z3D4 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.53■□□□□ 0.08
LYSMD3Q7Z3D4 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.53■□□□□ 0.08
LYSMD3Q7Z3D4 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.53■□□□□ 0.08
LYSMD3Q7Z3D4 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.53■□□□□ 0.08
LYSMD3Q7Z3D4 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.53■□□□□ 0.08
LYSMD3Q7Z3D4 BRI3BPP1-201ENST00000594224 787 ntBASIC15.53■□□□□ 0.08
LYSMD3Q7Z3D4 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.53■□□□□ 0.08
LYSMD3Q7Z3D4 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.53■□□□□ 0.08
LYSMD3Q7Z3D4 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
LYSMD3Q7Z3D4 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
LYSMD3Q7Z3D4 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LYSMD3Q7Z3D4 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.53■□□□□ 0.08
LYSMD3Q7Z3D4 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
LYSMD3Q7Z3D4 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LYSMD3Q7Z3D4 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
LYSMD3Q7Z3D4 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LYSMD3Q7Z3D4 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LYSMD3Q7Z3D4 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LYSMD3Q7Z3D4 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LYSMD3Q7Z3D4 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LYSMD3Q7Z3D4 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
LYSMD3Q7Z3D4 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LYSMD3Q7Z3D4 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
LYSMD3Q7Z3D4 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.52■□□□□ 0.08
LYSMD3Q7Z3D4 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LYSMD3Q7Z3D4 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LYSMD3Q7Z3D4 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.52■□□□□ 0.08
LYSMD3Q7Z3D4 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LYSMD3Q7Z3D4 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
LYSMD3Q7Z3D4 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LYSMD3Q7Z3D4 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.52■□□□□ 0.08
LYSMD3Q7Z3D4 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LYSMD3Q7Z3D4 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.52■□□□□ 0.08
LYSMD3Q7Z3D4 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LYSMD3Q7Z3D4 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.52■□□□□ 0.08
LYSMD3Q7Z3D4 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LYSMD3Q7Z3D4 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LYSMD3Q7Z3D4 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LYSMD3Q7Z3D4 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LYSMD3Q7Z3D4 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.52■□□□□ 0.08
LYSMD3Q7Z3D4 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.52■□□□□ 0.08
LYSMD3Q7Z3D4 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
LYSMD3Q7Z3D4 AP005018.1-201ENST00000525475 301 ntBASIC15.52■□□□□ 0.08
LYSMD3Q7Z3D4 AC092552.1-201ENST00000547243 906 ntBASIC15.52■□□□□ 0.08
LYSMD3Q7Z3D4 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.52■□□□□ 0.08
LYSMD3Q7Z3D4 CTBP2P3-201ENST00000585629 1255 ntBASIC15.52■□□□□ 0.08
LYSMD3Q7Z3D4 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.52■□□□□ 0.08
LYSMD3Q7Z3D4 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.52■□□□□ 0.08
LYSMD3Q7Z3D4 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
LYSMD3Q7Z3D4 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LYSMD3Q7Z3D4 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.52■□□□□ 0.08
LYSMD3Q7Z3D4 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
LYSMD3Q7Z3D4 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
LYSMD3Q7Z3D4 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LYSMD3Q7Z3D4 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
LYSMD3Q7Z3D4 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
LYSMD3Q7Z3D4 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.52■□□□□ 0.07
LYSMD3Q7Z3D4 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.52■□□□□ 0.07
LYSMD3Q7Z3D4 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
LYSMD3Q7Z3D4 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LYSMD3Q7Z3D4 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
LYSMD3Q7Z3D4 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.52■□□□□ 0.07
LYSMD3Q7Z3D4 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LYSMD3Q7Z3D4 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.07
LYSMD3Q7Z3D4 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
LYSMD3Q7Z3D4 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms