Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC10.33□□□□□ -0.76
SCXQ7RTU7 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC10.33□□□□□ -0.76
SCXQ7RTU7 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SCXQ7RTU7 SPTLC1P1-201ENST00000447199 261 ntBASIC10.33□□□□□ -0.76
SCXQ7RTU7 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC10.33□□□□□ -0.76
SCXQ7RTU7 GAPDHP21-201ENST00000450301 1010 ntBASIC10.33□□□□□ -0.76
SCXQ7RTU7 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
SCXQ7RTU7 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC10.33□□□□□ -0.76
SCXQ7RTU7 RN7SL618P-201ENST00000477850 296 ntBASIC10.33□□□□□ -0.76
SCXQ7RTU7 PUDP-206ENST00000540122 825 ntTSL 2 BASIC10.33□□□□□ -0.76
SCXQ7RTU7 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC10.33□□□□□ -0.76
SCXQ7RTU7 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC10.33□□□□□ -0.76
SCXQ7RTU7 AL079307.3-201ENST00000556114 283 ntBASIC10.33□□□□□ -0.76
SCXQ7RTU7 SPDYE22P-201ENST00000582158 798 ntBASIC10.33□□□□□ -0.76
SCXQ7RTU7 AC024267.1-201ENST00000582320 895 ntBASIC10.33□□□□□ -0.76
SCXQ7RTU7 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SCXQ7RTU7 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC10.33□□□□□ -0.76
SCXQ7RTU7 AL844908.2-201ENST00000609461 460 ntBASIC10.33□□□□□ -0.76
SCXQ7RTU7 AC008738.7-201ENST00000609744 511 ntBASIC10.33□□□□□ -0.76
SCXQ7RTU7 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SCXQ7RTU7 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC10.33□□□□□ -0.76
SCXQ7RTU7 AC025048.6-201ENST00000634326 1161 ntBASIC10.33□□□□□ -0.76
SCXQ7RTU7 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SCXQ7RTU7 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC10.33□□□□□ -0.76
SCXQ7RTU7 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SCXQ7RTU7 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC10.33□□□□□ -0.76
SCXQ7RTU7 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
SCXQ7RTU7 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SCXQ7RTU7 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SCXQ7RTU7 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SCXQ7RTU7 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SCXQ7RTU7 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC10.33□□□□□ -0.76
SCXQ7RTU7 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC10.33□□□□□ -0.76
SCXQ7RTU7 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SCXQ7RTU7 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC10.33□□□□□ -0.76
SCXQ7RTU7 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
SCXQ7RTU7 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC10.33□□□□□ -0.76
SCXQ7RTU7 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SCXQ7RTU7 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SCXQ7RTU7 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
SCXQ7RTU7 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SCXQ7RTU7 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC10.33□□□□□ -0.76
SCXQ7RTU7 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SCXQ7RTU7 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC10.33□□□□□ -0.76
SCXQ7RTU7 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SCXQ7RTU7 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SCXQ7RTU7 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SCXQ7RTU7 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
SCXQ7RTU7 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
SCXQ7RTU7 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC10.33□□□□□ -0.76
SCXQ7RTU7 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SCXQ7RTU7 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SCXQ7RTU7 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC10.32□□□□□ -0.76
SCXQ7RTU7 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
SCXQ7RTU7 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC10.32□□□□□ -0.76
SCXQ7RTU7 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
SCXQ7RTU7 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SCXQ7RTU7 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SCXQ7RTU7 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SCXQ7RTU7 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
SCXQ7RTU7 GPAA1P2-202ENST00000606848 1787 ntBASIC10.32□□□□□ -0.76
SCXQ7RTU7 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
SCXQ7RTU7 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC10.32□□□□□ -0.76
SCXQ7RTU7 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC10.32□□□□□ -0.76
SCXQ7RTU7 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
SCXQ7RTU7 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SCXQ7RTU7 PEG13-201ENST00000631594 5667 ntBASIC10.32□□□□□ -0.76
SCXQ7RTU7 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
SCXQ7RTU7 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SCXQ7RTU7 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
SCXQ7RTU7 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
SCXQ7RTU7 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC10.32□□□□□ -0.76
SCXQ7RTU7 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
SCXQ7RTU7 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC10.32□□□□□ -0.76
SCXQ7RTU7 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC10.32□□□□□ -0.76
SCXQ7RTU7 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
SCXQ7RTU7 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SCXQ7RTU7 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC10.32□□□□□ -0.76
SCXQ7RTU7 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC10.32□□□□□ -0.76
SCXQ7RTU7 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC10.32□□□□□ -0.76
SCXQ7RTU7 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
SCXQ7RTU7 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC10.32□□□□□ -0.76
SCXQ7RTU7 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SCXQ7RTU7 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC10.32□□□□□ -0.76
SCXQ7RTU7 RN7SL692P-201ENST00000464677 288 ntBASIC10.32□□□□□ -0.76
SCXQ7RTU7 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SCXQ7RTU7 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SCXQ7RTU7 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC10.32□□□□□ -0.76
SCXQ7RTU7 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC10.32□□□□□ -0.76
SCXQ7RTU7 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
SCXQ7RTU7 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC10.32□□□□□ -0.76
SCXQ7RTU7 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC10.32□□□□□ -0.76
SCXQ7RTU7 NAA38-207ENST00000576861 556 ntTSL 3 BASIC10.32□□□□□ -0.76
SCXQ7RTU7 AL132655.2-201ENST00000596276 594 ntBASIC10.32□□□□□ -0.76
SCXQ7RTU7 AL133215.2-201ENST00000609242 977 ntBASIC10.32□□□□□ -0.76
SCXQ7RTU7 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC10.32□□□□□ -0.76
SCXQ7RTU7 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC10.32□□□□□ -0.76
SCXQ7RTU7 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SCXQ7RTU7 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
SCXQ7RTU7 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC10.32□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms