Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CNKSR3Q6P9H4 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.37■□□□□ 0.21
CNKSR3Q6P9H4 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CNKSR3Q6P9H4 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC16.37■□□□□ 0.21
CNKSR3Q6P9H4 MVK-214ENST00000629016 1591 ntTSL 5 BASIC16.37■□□□□ 0.21
CNKSR3Q6P9H4 AL360270.3-201ENST00000609118 1348 ntBASIC16.37■□□□□ 0.21
CNKSR3Q6P9H4 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CNKSR3Q6P9H4 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CNKSR3Q6P9H4 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CNKSR3Q6P9H4 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CNKSR3Q6P9H4 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.37■□□□□ 0.21
CNKSR3Q6P9H4 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
CNKSR3Q6P9H4 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CNKSR3Q6P9H4 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC16.37■□□□□ 0.21
CNKSR3Q6P9H4 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.37■□□□□ 0.21
CNKSR3Q6P9H4 E2F3P2-201ENST00000447755 1422 ntBASIC16.36■□□□□ 0.21
CNKSR3Q6P9H4 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
CNKSR3Q6P9H4 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CNKSR3Q6P9H4 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CNKSR3Q6P9H4 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CNKSR3Q6P9H4 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CNKSR3Q6P9H4 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CNKSR3Q6P9H4 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC16.36■□□□□ 0.21
CNKSR3Q6P9H4 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CNKSR3Q6P9H4 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CNKSR3Q6P9H4 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CNKSR3Q6P9H4 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CNKSR3Q6P9H4 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CNKSR3Q6P9H4 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC16.36■□□□□ 0.21
CNKSR3Q6P9H4 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CNKSR3Q6P9H4 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC16.36■□□□□ 0.21
CNKSR3Q6P9H4 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC16.36■□□□□ 0.21
CNKSR3Q6P9H4 RCC2P8-201ENST00000502779 1035 ntBASIC16.36■□□□□ 0.21
CNKSR3Q6P9H4 AC019193.1-201ENST00000506678 823 ntBASIC16.36■□□□□ 0.21
CNKSR3Q6P9H4 AC116345.2-201ENST00000512837 523 ntBASIC16.36■□□□□ 0.21
CNKSR3Q6P9H4 RTN3P1-201ENST00000536295 711 ntBASIC16.36■□□□□ 0.21
CNKSR3Q6P9H4 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC16.36■□□□□ 0.21
CNKSR3Q6P9H4 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC16.36■□□□□ 0.21
CNKSR3Q6P9H4 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC16.36■□□□□ 0.21
CNKSR3Q6P9H4 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CNKSR3Q6P9H4 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC16.36■□□□□ 0.21
CNKSR3Q6P9H4 AC138696.2-201ENST00000607376 223 ntBASIC16.36■□□□□ 0.21
CNKSR3Q6P9H4 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC16.36■□□□□ 0.21
CNKSR3Q6P9H4 AP003419.4-201ENST00000616071 517 ntBASIC16.36■□□□□ 0.21
CNKSR3Q6P9H4 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CNKSR3Q6P9H4 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CNKSR3Q6P9H4 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC16.36■□□□□ 0.21
CNKSR3Q6P9H4 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CNKSR3Q6P9H4 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CNKSR3Q6P9H4 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
CNKSR3Q6P9H4 TNRC18P3-201ENST00000441896 2691 ntBASIC16.36■□□□□ 0.21
CNKSR3Q6P9H4 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
CNKSR3Q6P9H4 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CNKSR3Q6P9H4 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CNKSR3Q6P9H4 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CNKSR3Q6P9H4 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CNKSR3Q6P9H4 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC16.36■□□□□ 0.21
CNKSR3Q6P9H4 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CNKSR3Q6P9H4 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CNKSR3Q6P9H4 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CNKSR3Q6P9H4 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CNKSR3Q6P9H4 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CNKSR3Q6P9H4 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CNKSR3Q6P9H4 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CNKSR3Q6P9H4 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CNKSR3Q6P9H4 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.35■□□□□ 0.21
CNKSR3Q6P9H4 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CNKSR3Q6P9H4 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CNKSR3Q6P9H4 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.35■□□□□ 0.21
CNKSR3Q6P9H4 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CNKSR3Q6P9H4 RBM38-204ENST00000371219 760 ntTSL 2 BASIC16.35■□□□□ 0.21
CNKSR3Q6P9H4 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC16.35■□□□□ 0.21
CNKSR3Q6P9H4 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CNKSR3Q6P9H4 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC16.35■□□□□ 0.21
CNKSR3Q6P9H4 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CNKSR3Q6P9H4 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CNKSR3Q6P9H4 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CNKSR3Q6P9H4 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC16.35■□□□□ 0.21
CNKSR3Q6P9H4 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CNKSR3Q6P9H4 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC16.35■□□□□ 0.21
CNKSR3Q6P9H4 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC16.35■□□□□ 0.21
CNKSR3Q6P9H4 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
CNKSR3Q6P9H4 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CNKSR3Q6P9H4 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CNKSR3Q6P9H4 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CNKSR3Q6P9H4 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CNKSR3Q6P9H4 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CNKSR3Q6P9H4 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CNKSR3Q6P9H4 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CNKSR3Q6P9H4 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC16.35■□□□□ 0.21
CNKSR3Q6P9H4 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CNKSR3Q6P9H4 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CNKSR3Q6P9H4 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CNKSR3Q6P9H4 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CNKSR3Q6P9H4 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CNKSR3Q6P9H4 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CNKSR3Q6P9H4 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CNKSR3Q6P9H4 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CNKSR3Q6P9H4 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CNKSR3Q6P9H4 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms