Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.9□□□□□ -0.18
CCDC58Q4VC31 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC58Q4VC31 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.9□□□□□ -0.18
CCDC58Q4VC31 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
CCDC58Q4VC31 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC58Q4VC31 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC58Q4VC31 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CCDC58Q4VC31 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC58Q4VC31 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC58Q4VC31 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC58Q4VC31 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CCDC58Q4VC31 AC002056.1-201ENST00000395613 760 ntBASIC13.9□□□□□ -0.18
CCDC58Q4VC31 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC13.9□□□□□ -0.18
CCDC58Q4VC31 EMBP1-201ENST00000458200 901 ntBASIC13.9□□□□□ -0.18
CCDC58Q4VC31 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC13.9□□□□□ -0.18
CCDC58Q4VC31 AC079776.4-201ENST00000511039 504 ntBASIC13.9□□□□□ -0.18
CCDC58Q4VC31 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC13.9□□□□□ -0.18
CCDC58Q4VC31 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.9□□□□□ -0.18
CCDC58Q4VC31 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC13.9□□□□□ -0.18
CCDC58Q4VC31 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC13.9□□□□□ -0.18
CCDC58Q4VC31 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC13.9□□□□□ -0.18
CCDC58Q4VC31 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC13.9□□□□□ -0.18
CCDC58Q4VC31 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC13.9□□□□□ -0.18
CCDC58Q4VC31 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC13.9□□□□□ -0.18
CCDC58Q4VC31 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.9□□□□□ -0.18
CCDC58Q4VC31 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC58Q4VC31 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC58Q4VC31 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.9□□□□□ -0.18
CCDC58Q4VC31 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC58Q4VC31 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.9□□□□□ -0.18
CCDC58Q4VC31 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.9□□□□□ -0.18
CCDC58Q4VC31 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC58Q4VC31 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC58Q4VC31 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC58Q4VC31 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC58Q4VC31 INVS-201ENST00000262456 2968 ntTSL 5 BASIC13.9□□□□□ -0.18
CCDC58Q4VC31 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC58Q4VC31 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CCDC58Q4VC31 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC58Q4VC31 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC58Q4VC31 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.9□□□□□ -0.18
CCDC58Q4VC31 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC13.9□□□□□ -0.18
CCDC58Q4VC31 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CCDC58Q4VC31 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC58Q4VC31 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.9□□□□□ -0.18
CCDC58Q4VC31 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CCDC58Q4VC31 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC13.9□□□□□ -0.19
CCDC58Q4VC31 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
CCDC58Q4VC31 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
CCDC58Q4VC31 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC13.9□□□□□ -0.19
CCDC58Q4VC31 REM2-202ENST00000536884 1331 ntTSL 2 BASIC13.9□□□□□ -0.19
CCDC58Q4VC31 BCAR1-209ENST00000546196 1340 ntBASIC13.9□□□□□ -0.19
CCDC58Q4VC31 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC58Q4VC31 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.89□□□□□ -0.19
CCDC58Q4VC31 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC58Q4VC31 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC58Q4VC31 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CCDC58Q4VC31 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
CCDC58Q4VC31 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
CCDC58Q4VC31 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.89□□□□□ -0.19
CCDC58Q4VC31 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC58Q4VC31 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC58Q4VC31 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC58Q4VC31 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
CCDC58Q4VC31 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC58Q4VC31 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
CCDC58Q4VC31 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC58Q4VC31 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC58Q4VC31 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC58Q4VC31 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.89□□□□□ -0.19
CCDC58Q4VC31 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC58Q4VC31 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC58Q4VC31 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC58Q4VC31 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
CCDC58Q4VC31 AL031284.1-201ENST00000419297 478 ntBASIC13.89□□□□□ -0.19
CCDC58Q4VC31 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC13.89□□□□□ -0.19
CCDC58Q4VC31 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC13.89□□□□□ -0.19
CCDC58Q4VC31 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC13.89□□□□□ -0.19
CCDC58Q4VC31 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC13.89□□□□□ -0.19
CCDC58Q4VC31 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC13.89□□□□□ -0.19
CCDC58Q4VC31 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC58Q4VC31 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC58Q4VC31 MIR7706-201ENST00000613747 67 ntBASIC13.89□□□□□ -0.19
CCDC58Q4VC31 AC004877.2-201ENST00000623941 599 ntBASIC13.89□□□□□ -0.19
CCDC58Q4VC31 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC13.89□□□□□ -0.19
CCDC58Q4VC31 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CCDC58Q4VC31 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC58Q4VC31 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC58Q4VC31 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
CCDC58Q4VC31 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC58Q4VC31 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
CCDC58Q4VC31 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CCDC58Q4VC31 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC13.89□□□□□ -0.19
CCDC58Q4VC31 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
CCDC58Q4VC31 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC58Q4VC31 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC13.89□□□□□ -0.19
CCDC58Q4VC31 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC58Q4VC31 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC58Q4VC31 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CCDC58Q4VC31 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms