Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 CSF2RBP1-201ENST00000447905 391 ntBASIC17.67■□□□□ 0.42
USH1GQ495M9 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC17.67■□□□□ 0.42
USH1GQ495M9 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC17.67■□□□□ 0.42
USH1GQ495M9 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
USH1GQ495M9 AP000812.2-201ENST00000538934 718 ntBASIC17.67■□□□□ 0.42
USH1GQ495M9 AC025279.2-201ENST00000569730 653 ntBASIC17.67■□□□□ 0.42
USH1GQ495M9 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC17.67■□□□□ 0.42
USH1GQ495M9 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
USH1GQ495M9 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC17.67■□□□□ 0.42
USH1GQ495M9 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
USH1GQ495M9 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
USH1GQ495M9 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.67■□□□□ 0.42
USH1GQ495M9 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
USH1GQ495M9 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
USH1GQ495M9 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
USH1GQ495M9 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
USH1GQ495M9 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.67■□□□□ 0.42
USH1GQ495M9 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
USH1GQ495M9 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC17.67■□□□□ 0.42
USH1GQ495M9 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
USH1GQ495M9 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
USH1GQ495M9 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
USH1GQ495M9 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
USH1GQ495M9 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
USH1GQ495M9 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.67■□□□□ 0.42
USH1GQ495M9 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
USH1GQ495M9 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
USH1GQ495M9 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
USH1GQ495M9 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC17.66■□□□□ 0.42
USH1GQ495M9 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
USH1GQ495M9 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
USH1GQ495M9 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
USH1GQ495M9 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC17.66■□□□□ 0.42
USH1GQ495M9 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
USH1GQ495M9 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
USH1GQ495M9 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
USH1GQ495M9 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
USH1GQ495M9 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
USH1GQ495M9 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
USH1GQ495M9 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
USH1GQ495M9 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
USH1GQ495M9 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
USH1GQ495M9 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
USH1GQ495M9 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC17.66■□□□□ 0.42
USH1GQ495M9 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
USH1GQ495M9 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
USH1GQ495M9 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
USH1GQ495M9 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC17.66■□□□□ 0.42
USH1GQ495M9 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC17.66■□□□□ 0.42
USH1GQ495M9 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
USH1GQ495M9 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC17.66■□□□□ 0.42
USH1GQ495M9 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC17.66■□□□□ 0.42
USH1GQ495M9 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC17.66■□□□□ 0.42
USH1GQ495M9 SAMD11P1-201ENST00000571429 661 ntBASIC17.66■□□□□ 0.42
USH1GQ495M9 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC17.66■□□□□ 0.42
USH1GQ495M9 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC17.66■□□□□ 0.42
USH1GQ495M9 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC17.66■□□□□ 0.42
USH1GQ495M9 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.66■□□□□ 0.42
USH1GQ495M9 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
USH1GQ495M9 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
USH1GQ495M9 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
USH1GQ495M9 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
USH1GQ495M9 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.66■□□□□ 0.42
USH1GQ495M9 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
USH1GQ495M9 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.65■□□□□ 0.42
USH1GQ495M9 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
USH1GQ495M9 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
USH1GQ495M9 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC17.65■□□□□ 0.42
USH1GQ495M9 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USH1GQ495M9 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
USH1GQ495M9 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
USH1GQ495M9 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC17.65■□□□□ 0.42
USH1GQ495M9 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC17.65■□□□□ 0.42
USH1GQ495M9 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USH1GQ495M9 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
USH1GQ495M9 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
USH1GQ495M9 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
USH1GQ495M9 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC17.65■□□□□ 0.42
USH1GQ495M9 ACTBP8-201ENST00000403258 1108 ntBASIC17.65■□□□□ 0.42
USH1GQ495M9 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
USH1GQ495M9 AC026954.1-201ENST00000429771 1293 ntBASIC17.65■□□□□ 0.42
USH1GQ495M9 FAM197Y7-201ENST00000432892 766 ntBASIC17.65■□□□□ 0.42
USH1GQ495M9 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
USH1GQ495M9 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
USH1GQ495M9 AL590640.2-201ENST00000457038 527 ntBASIC17.65■□□□□ 0.42
USH1GQ495M9 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC17.65■□□□□ 0.42
USH1GQ495M9 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USH1GQ495M9 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
USH1GQ495M9 REXO1L6P-201ENST00000603433 1515 ntBASIC17.65■□□□□ 0.42
USH1GQ495M9 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC17.65■□□□□ 0.42
USH1GQ495M9 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USH1GQ495M9 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC17.65■□□□□ 0.42
USH1GQ495M9 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
USH1GQ495M9 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
USH1GQ495M9 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
USH1GQ495M9 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
USH1GQ495M9 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
USH1GQ495M9 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USH1GQ495M9 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.65■□□□□ 0.42
USH1GQ495M9 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms