Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
RPL39P62891 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC10.98□□□□□ -0.65
RPL39P62891 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC10.98□□□□□ -0.65
RPL39P62891 TCAP-202ENST00000578283 583 ntTSL 5 BASIC10.98□□□□□ -0.65
RPL39P62891 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
RPL39P62891 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC10.98□□□□□ -0.65
RPL39P62891 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
RPL39P62891 SPTSSB-204ENST00000617024 1292 ntBASIC10.98□□□□□ -0.65
RPL39P62891 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
RPL39P62891 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
RPL39P62891 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
RPL39P62891 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC10.98□□□□□ -0.65
RPL39P62891 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
RPL39P62891 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
RPL39P62891 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
RPL39P62891 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
RPL39P62891 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC10.98□□□□□ -0.65
RPL39P62891 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC10.98□□□□□ -0.65
RPL39P62891 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
RPL39P62891 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
RPL39P62891 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
RPL39P62891 KRT8P37-201ENST00000451609 1420 ntBASIC10.98□□□□□ -0.65
RPL39P62891 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC10.98□□□□□ -0.65
RPL39P62891 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
RPL39P62891 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
RPL39P62891 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
RPL39P62891 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
RPL39P62891 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
RPL39P62891 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
RPL39P62891 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
RPL39P62891 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
RPL39P62891 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
RPL39P62891 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
RPL39P62891 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
RPL39P62891 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
RPL39P62891 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
RPL39P62891 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
RPL39P62891 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC10.97□□□□□ -0.65
RPL39P62891 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
RPL39P62891 REXO1L2P-201ENST00000425429 2069 ntBASIC10.97□□□□□ -0.65
RPL39P62891 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC10.97□□□□□ -0.65
RPL39P62891 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC10.97□□□□□ -0.65
RPL39P62891 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC10.97□□□□□ -0.65
RPL39P62891 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
RPL39P62891 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RPL39P62891 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
RPL39P62891 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC10.97□□□□□ -0.65
RPL39P62891 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
RPL39P62891 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
RPL39P62891 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
RPL39P62891 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RPL39P62891 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
RPL39P62891 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RPL39P62891 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RPL39P62891 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
RPL39P62891 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
RPL39P62891 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
RPL39P62891 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
RPL39P62891 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RPL39P62891 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RPL39P62891 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
RPL39P62891 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
RPL39P62891 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC10.97□□□□□ -0.65
RPL39P62891 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC10.97□□□□□ -0.65
RPL39P62891 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC10.97□□□□□ -0.65
RPL39P62891 TOLLIP-AS1-201ENST00000530897 939 ntBASIC10.97□□□□□ -0.65
RPL39P62891 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC10.97□□□□□ -0.65
RPL39P62891 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC10.97□□□□□ -0.65
RPL39P62891 AC096734.2-201ENST00000562054 433 ntBASIC10.97□□□□□ -0.65
RPL39P62891 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC10.97□□□□□ -0.65
RPL39P62891 AL138918.1-201ENST00000568306 659 ntBASIC10.97□□□□□ -0.65
RPL39P62891 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
RPL39P62891 TBCB-205ENST00000585746 875 ntTSL 3 BASIC10.97□□□□□ -0.65
RPL39P62891 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC10.97□□□□□ -0.65
RPL39P62891 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
RPL39P62891 AC023141.13-201ENST00000604991 943 ntBASIC10.97□□□□□ -0.65
RPL39P62891 IFNL4P1-201ENST00000607083 540 ntBASIC10.97□□□□□ -0.65
RPL39P62891 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
RPL39P62891 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC10.97□□□□□ -0.65
RPL39P62891 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
RPL39P62891 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC10.97□□□□□ -0.65
RPL39P62891 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
RPL39P62891 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC10.97□□□□□ -0.65
RPL39P62891 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RPL39P62891 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC10.97□□□□□ -0.65
RPL39P62891 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC10.97□□□□□ -0.65
RPL39P62891 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC10.97□□□□□ -0.65
RPL39P62891 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC10.97□□□□□ -0.65
RPL39P62891 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
RPL39P62891 FES-203ENST00000394302 2133 ntTSL 5 BASIC10.97□□□□□ -0.65
RPL39P62891 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC10.97□□□□□ -0.65
RPL39P62891 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
RPL39P62891 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
RPL39P62891 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
RPL39P62891 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
RPL39P62891 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RPL39P62891 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
RPL39P62891 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RPL39P62891 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
RPL39P62891 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms