Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
RAB5BP61020 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
RAB5BP61020 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
RAB5BP61020 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RAB5BP61020 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC12.09□□□□□ -0.47
RAB5BP61020 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC12.09□□□□□ -0.47
RAB5BP61020 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RAB5BP61020 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RAB5BP61020 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RAB5BP61020 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RAB5BP61020 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
RAB5BP61020 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RAB5BP61020 OR2I1P-208ENST00000641137 4948 ntBASIC12.09□□□□□ -0.47
RAB5BP61020 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
RAB5BP61020 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC12.09□□□□□ -0.47
RAB5BP61020 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
RAB5BP61020 ACE3P-201ENST00000423435 1973 ntBASIC12.09□□□□□ -0.47
RAB5BP61020 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RAB5BP61020 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
RAB5BP61020 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RAB5BP61020 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
RAB5BP61020 ADAMTSL4-202ENST00000369038 4167 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
RAB5BP61020 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
RAB5BP61020 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RAB5BP61020 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RAB5BP61020 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
RAB5BP61020 C10orf90-202ENST00000356858 2995 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
RAB5BP61020 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
RAB5BP61020 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
RAB5BP61020 CRYGFP-201ENST00000418459 633 ntBASIC12.09□□□□□ -0.47
RAB5BP61020 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
RAB5BP61020 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC12.09□□□□□ -0.47
RAB5BP61020 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RAB5BP61020 RNA5SP413-201ENST00000516373 109 ntBASIC12.09□□□□□ -0.47
RAB5BP61020 AP003097.1-201ENST00000530657 1135 ntBASIC12.09□□□□□ -0.47
RAB5BP61020 BX088651.1-201ENST00000540551 451 ntBASIC12.09□□□□□ -0.47
RAB5BP61020 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC12.09□□□□□ -0.47
RAB5BP61020 AC233263.1-201ENST00000578059 224 ntBASIC12.09□□□□□ -0.47
RAB5BP61020 RPS15-203ENST00000586096 570 ntTSL 2 BASIC12.09□□□□□ -0.47
RAB5BP61020 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC12.09□□□□□ -0.47
RAB5BP61020 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC12.09□□□□□ -0.47
RAB5BP61020 AC024243.1-201ENST00000609234 778 ntBASIC12.09□□□□□ -0.47
RAB5BP61020 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC12.09□□□□□ -0.47
RAB5BP61020 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
RAB5BP61020 ANKRD20A8P-203ENST00000641373 517 ntBASIC12.09□□□□□ -0.47
RAB5BP61020 VPS13A-204ENST00000376634 10269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
RAB5BP61020 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RAB5BP61020 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC12.09□□□□□ -0.47
RAB5BP61020 PCCB-210ENST00000471595 6090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
RAB5BP61020 PIK3CD-202ENST00000377346 5203 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RAB5BP61020 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
RAB5BP61020 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC12.09□□□□□ -0.47
RAB5BP61020 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RAB5BP61020 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
RAB5BP61020 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
RAB5BP61020 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
RAB5BP61020 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
RAB5BP61020 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RAB5BP61020 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
RAB5BP61020 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC12.09□□□□□ -0.47
RAB5BP61020 ABI1-213ENST00000536334 3380 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RAB5BP61020 KCNA1-201ENST00000382545 7997 ntAPPRIS P1 TSL 4 BASIC12.08□□□□□ -0.47
RAB5BP61020 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
RAB5BP61020 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.47
RAB5BP61020 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
RAB5BP61020 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.47
RAB5BP61020 LGALS8-AS1-201ENST00000487567 1457 ntBASIC12.08□□□□□ -0.47
RAB5BP61020 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
RAB5BP61020 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
RAB5BP61020 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
RAB5BP61020 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
RAB5BP61020 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC12.08□□□□□ -0.48
RAB5BP61020 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RAB5BP61020 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
RAB5BP61020 STRC-213ENST00000541030 5305 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
RAB5BP61020 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
RAB5BP61020 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
RAB5BP61020 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
RAB5BP61020 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
RAB5BP61020 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
RAB5BP61020 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC12.08□□□□□ -0.48
RAB5BP61020 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC12.08□□□□□ -0.48
RAB5BP61020 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RAB5BP61020 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
RAB5BP61020 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
RAB5BP61020 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
RAB5BP61020 GAS7-202ENST00000396115 929 ntTSL 5 BASIC12.08□□□□□ -0.48
RAB5BP61020 FDX2-206ENST00000492239 773 ntTSL 2 BASIC12.08□□□□□ -0.48
RAB5BP61020 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC12.08□□□□□ -0.48
RAB5BP61020 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC12.08□□□□□ -0.48
RAB5BP61020 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RAB5BP61020 AL023803.3-201ENST00000615559 522 ntBASIC12.08□□□□□ -0.48
RAB5BP61020 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC12.08□□□□□ -0.48
RAB5BP61020 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC12.08□□□□□ -0.48
RAB5BP61020 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC12.08□□□□□ -0.48
RAB5BP61020 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RAB5BP61020 FANCA-202ENST00000389301 5451 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
RAB5BP61020 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC12.08□□□□□ -0.48
RAB5BP61020 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RAB5BP61020 SH2D7-201ENST00000328828 2750 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms