Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
RAB5CP51148 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB5CP51148 AP001267.2-201ENST00000532619 2086 ntBASIC12.48□□□□□ -0.41
RAB5CP51148 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC12.48□□□□□ -0.41
RAB5CP51148 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB5CP51148 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB5CP51148 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
RAB5CP51148 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
RAB5CP51148 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB5CP51148 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB5CP51148 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB5CP51148 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB5CP51148 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB5CP51148 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB5CP51148 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RAB5CP51148 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC12.48□□□□□ -0.41
RAB5CP51148 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC12.48□□□□□ -0.41
RAB5CP51148 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC12.48□□□□□ -0.41
RAB5CP51148 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB5CP51148 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB5CP51148 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
RAB5CP51148 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RAB5CP51148 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB5CP51148 ZBTB45P2-201ENST00000452245 1531 ntBASIC12.47□□□□□ -0.41
RAB5CP51148 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RAB5CP51148 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
RAB5CP51148 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC12.47□□□□□ -0.41
RAB5CP51148 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
RAB5CP51148 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
RAB5CP51148 AMT-221ENST00000538581 2038 ntTSL 2 BASIC12.47□□□□□ -0.41
RAB5CP51148 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RAB5CP51148 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB5CP51148 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB5CP51148 NIN-202ENST00000324330 4364 ntTSL 5 BASIC12.47□□□□□ -0.41
RAB5CP51148 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC12.47□□□□□ -0.41
RAB5CP51148 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
RAB5CP51148 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB5CP51148 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
RAB5CP51148 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC12.47□□□□□ -0.41
RAB5CP51148 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC12.47□□□□□ -0.41
RAB5CP51148 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RAB5CP51148 KRT18P38-201ENST00000449496 1282 ntBASIC12.47□□□□□ -0.41
RAB5CP51148 HS6ST1P1-201ENST00000481504 1234 ntBASIC12.47□□□□□ -0.41
RAB5CP51148 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB5CP51148 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC12.47□□□□□ -0.41
RAB5CP51148 CLN6-204ENST00000564752 900 ntTSL 3 BASIC12.47□□□□□ -0.41
RAB5CP51148 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RAB5CP51148 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC12.47□□□□□ -0.41
RAB5CP51148 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC12.47□□□□□ -0.41
RAB5CP51148 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC12.47□□□□□ -0.41
RAB5CP51148 AC114341.1-201ENST00000618070 349 ntBASIC12.47□□□□□ -0.41
RAB5CP51148 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC12.47□□□□□ -0.41
RAB5CP51148 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC12.47□□□□□ -0.41
RAB5CP51148 CLN6-214ENST00000636314 442 ntTSL 3 BASIC12.47□□□□□ -0.41
RAB5CP51148 AC097493.4-201ENST00000641197 219 ntBASIC12.47□□□□□ -0.41
RAB5CP51148 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC12.47□□□□□ -0.41
RAB5CP51148 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB5CP51148 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB5CP51148 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
RAB5CP51148 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB5CP51148 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC12.47□□□□□ -0.41
RAB5CP51148 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC12.47□□□□□ -0.41
RAB5CP51148 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB5CP51148 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC12.47□□□□□ -0.41
RAB5CP51148 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB5CP51148 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB5CP51148 NUTM2HP-201ENST00000442076 2498 ntBASIC12.47□□□□□ -0.41
RAB5CP51148 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
RAB5CP51148 AC015818.8-201ENST00000587907 1519 ntBASIC12.47□□□□□ -0.41
RAB5CP51148 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
RAB5CP51148 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
RAB5CP51148 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC12.47□□□□□ -0.41
RAB5CP51148 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC12.47□□□□□ -0.41
RAB5CP51148 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
RAB5CP51148 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
RAB5CP51148 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
RAB5CP51148 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
RAB5CP51148 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
RAB5CP51148 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
RAB5CP51148 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RAB5CP51148 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
RAB5CP51148 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
RAB5CP51148 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC12.46□□□□□ -0.41
RAB5CP51148 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
RAB5CP51148 HADH-202ENST00000403312 1752 ntTSL 5 BASIC12.46□□□□□ -0.41
RAB5CP51148 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC12.46□□□□□ -0.41
RAB5CP51148 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
RAB5CP51148 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
RAB5CP51148 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
RAB5CP51148 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
RAB5CP51148 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
RAB5CP51148 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RAB5CP51148 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RAB5CP51148 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RAB5CP51148 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RAB5CP51148 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RAB5CP51148 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RAB5CP51148 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
RAB5CP51148 PMS2P4-201ENST00000412466 1052 ntBASIC12.46□□□□□ -0.41
RAB5CP51148 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms