Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 AC005593.1-201ENST00000624894 515 ntBASIC12.28□□□□□ -0.44
CDC34P49427 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CDC34P49427 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
CDC34P49427 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC12.28□□□□□ -0.44
CDC34P49427 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CDC34P49427 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CDC34P49427 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
CDC34P49427 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
CDC34P49427 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CDC34P49427 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CDC34P49427 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CDC34P49427 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CDC34P49427 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
CDC34P49427 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC12.28□□□□□ -0.44
CDC34P49427 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CDC34P49427 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CDC34P49427 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CDC34P49427 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CDC34P49427 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
CDC34P49427 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC12.28□□□□□ -0.44
CDC34P49427 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
CDC34P49427 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CDC34P49427 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CDC34P49427 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC12.27□□□□□ -0.44
CDC34P49427 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC12.27□□□□□ -0.44
CDC34P49427 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
CDC34P49427 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
CDC34P49427 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
CDC34P49427 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CDC34P49427 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
CDC34P49427 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
CDC34P49427 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
CDC34P49427 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CDC34P49427 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CDC34P49427 AC113367.3-201ENST00000508316 1912 ntBASIC12.27□□□□□ -0.44
CDC34P49427 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
CDC34P49427 MTHFR-210ENST00000641407 2387 ntBASIC12.27□□□□□ -0.44
CDC34P49427 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC12.27□□□□□ -0.44
CDC34P49427 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CDC34P49427 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CDC34P49427 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CDC34P49427 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
CDC34P49427 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CDC34P49427 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
CDC34P49427 REXO1L2P-201ENST00000425429 2069 ntBASIC12.27□□□□□ -0.45
CDC34P49427 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC12.27□□□□□ -0.45
CDC34P49427 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CDC34P49427 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
CDC34P49427 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
CDC34P49427 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
CDC34P49427 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CDC34P49427 MED22-202ENST00000371999 987 ntTSL 3 BASIC12.27□□□□□ -0.45
CDC34P49427 AC004987.2-201ENST00000395959 1148 ntBASIC12.27□□□□□ -0.45
CDC34P49427 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
CDC34P49427 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
CDC34P49427 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC12.27□□□□□ -0.45
CDC34P49427 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC12.27□□□□□ -0.45
CDC34P49427 PAM16-208ENST00000573553 722 ntTSL 2 BASIC12.27□□□□□ -0.45
CDC34P49427 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CDC34P49427 AC024267.1-201ENST00000582320 895 ntBASIC12.27□□□□□ -0.45
CDC34P49427 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC12.27□□□□□ -0.45
CDC34P49427 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC12.27□□□□□ -0.45
CDC34P49427 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
CDC34P49427 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CDC34P49427 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
CDC34P49427 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC12.27□□□□□ -0.45
CDC34P49427 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC12.27□□□□□ -0.45
CDC34P49427 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CDC34P49427 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CDC34P49427 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
CDC34P49427 AC005252.3-201ENST00000623855 2258 ntBASIC12.27□□□□□ -0.45
CDC34P49427 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
CDC34P49427 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
CDC34P49427 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CDC34P49427 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CDC34P49427 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC12.27□□□□□ -0.45
CDC34P49427 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
CDC34P49427 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CDC34P49427 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CDC34P49427 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CDC34P49427 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC12.27□□□□□ -0.45
CDC34P49427 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
CDC34P49427 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CDC34P49427 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CDC34P49427 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC12.27□□□□□ -0.45
CDC34P49427 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
CDC34P49427 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CDC34P49427 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
CDC34P49427 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CDC34P49427 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CDC34P49427 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC12.26□□□□□ -0.45
CDC34P49427 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC12.26□□□□□ -0.45
CDC34P49427 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC12.26□□□□□ -0.45
CDC34P49427 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
CDC34P49427 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CDC34P49427 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CDC34P49427 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CDC34P49427 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CDC34P49427 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CDC34P49427 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms