Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK1A1P48729 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK1A1P48729 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CSNK1A1P48729 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK1A1P48729 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CSNK1A1P48729 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK1A1P48729 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK1A1P48729 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
CSNK1A1P48729 AC023024.2-201ENST00000623561 1993 ntBASIC13.78□□□□□ -0.2
CSNK1A1P48729 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK1A1P48729 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CSNK1A1P48729 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK1A1P48729 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.78□□□□□ -0.2
CSNK1A1P48729 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CSNK1A1P48729 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK1A1P48729 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK1A1P48729 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
CSNK1A1P48729 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK1A1P48729 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK1A1P48729 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CSNK1A1P48729 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK1A1P48729 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.78□□□□□ -0.2
CSNK1A1P48729 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.78□□□□□ -0.2
CSNK1A1P48729 AL589987.1-201ENST00000453380 819 ntBASIC13.78□□□□□ -0.2
CSNK1A1P48729 DOC2GP-202ENST00000514950 1163 ntBASIC13.78□□□□□ -0.2
CSNK1A1P48729 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK1A1P48729 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK1A1P48729 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.78□□□□□ -0.2
CSNK1A1P48729 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.78□□□□□ -0.2
CSNK1A1P48729 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.78□□□□□ -0.2
CSNK1A1P48729 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.78□□□□□ -0.2
CSNK1A1P48729 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK1A1P48729 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK1A1P48729 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK1A1P48729 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.78□□□□□ -0.2
CSNK1A1P48729 AC025181.2-201ENST00000606994 802 ntBASIC13.78□□□□□ -0.2
CSNK1A1P48729 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.78□□□□□ -0.2
CSNK1A1P48729 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.78□□□□□ -0.2
CSNK1A1P48729 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.78□□□□□ -0.2
CSNK1A1P48729 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.78□□□□□ -0.2
CSNK1A1P48729 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.78□□□□□ -0.2
CSNK1A1P48729 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.78□□□□□ -0.2
CSNK1A1P48729 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.78□□□□□ -0.2
CSNK1A1P48729 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CSNK1A1P48729 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK1A1P48729 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK1A1P48729 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK1A1P48729 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.78□□□□□ -0.2
CSNK1A1P48729 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK1A1P48729 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
CSNK1A1P48729 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK1A1P48729 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.78□□□□□ -0.2
CSNK1A1P48729 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK1A1P48729 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
CSNK1A1P48729 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK1A1P48729 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK1A1P48729 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.78□□□□□ -0.2
CSNK1A1P48729 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK1A1P48729 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK1A1P48729 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK1A1P48729 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK1A1P48729 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK1A1P48729 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK1A1P48729 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK1A1P48729 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK1A1P48729 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
CSNK1A1P48729 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
CSNK1A1P48729 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
CSNK1A1P48729 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CSNK1A1P48729 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC13.77□□□□□ -0.2
CSNK1A1P48729 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
CSNK1A1P48729 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CSNK1A1P48729 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CSNK1A1P48729 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
CSNK1A1P48729 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
CSNK1A1P48729 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.2
CSNK1A1P48729 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CSNK1A1P48729 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CSNK1A1P48729 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
CSNK1A1P48729 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC13.77□□□□□ -0.21
CSNK1A1P48729 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
CSNK1A1P48729 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CSNK1A1P48729 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
CSNK1A1P48729 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CSNK1A1P48729 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CSNK1A1P48729 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CSNK1A1P48729 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CSNK1A1P48729 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CSNK1A1P48729 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CSNK1A1P48729 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
CSNK1A1P48729 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC13.77□□□□□ -0.21
CSNK1A1P48729 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC13.77□□□□□ -0.21
CSNK1A1P48729 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
CSNK1A1P48729 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.77□□□□□ -0.21
CSNK1A1P48729 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CSNK1A1P48729 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
CSNK1A1P48729 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
CSNK1A1P48729 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.77□□□□□ -0.21
CSNK1A1P48729 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.77□□□□□ -0.21
CSNK1A1P48729 TPRX2P-201ENST00000535362 881 ntBASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms