Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 AREG-202ENST00000502307 956 ntTSL 5 BASIC17.19■□□□□ 0.34
TM4SF4P48230 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC17.19■□□□□ 0.34
TM4SF4P48230 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC17.19■□□□□ 0.34
TM4SF4P48230 AC114947.1-202ENST00000514136 344 ntBASIC17.19■□□□□ 0.34
TM4SF4P48230 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TM4SF4P48230 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC17.19■□□□□ 0.34
TM4SF4P48230 AL118516.1-201ENST00000564152 670 ntBASIC17.19■□□□□ 0.34
TM4SF4P48230 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC17.19■□□□□ 0.34
TM4SF4P48230 RN7SL470P-201ENST00000583069 259 ntBASIC17.19■□□□□ 0.34
TM4SF4P48230 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC17.19■□□□□ 0.34
TM4SF4P48230 AC073592.2-201ENST00000623062 780 ntBASIC17.19■□□□□ 0.34
TM4SF4P48230 CMC2-224ENST00000630396 481 ntTSL 5 BASIC17.19■□□□□ 0.34
TM4SF4P48230 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TM4SF4P48230 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TM4SF4P48230 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TM4SF4P48230 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TM4SF4P48230 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
TM4SF4P48230 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
TM4SF4P48230 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TM4SF4P48230 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TM4SF4P48230 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TM4SF4P48230 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TM4SF4P48230 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TM4SF4P48230 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TM4SF4P48230 CYP4F23P-201ENST00000593402 1579 ntBASIC17.19■□□□□ 0.34
TM4SF4P48230 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC17.19■□□□□ 0.34
TM4SF4P48230 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TM4SF4P48230 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TM4SF4P48230 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
TM4SF4P48230 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.18■□□□□ 0.34
TM4SF4P48230 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TM4SF4P48230 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC17.18■□□□□ 0.34
TM4SF4P48230 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.18■□□□□ 0.34
TM4SF4P48230 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TM4SF4P48230 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC17.18■□□□□ 0.34
TM4SF4P48230 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TM4SF4P48230 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC17.18■□□□□ 0.34
TM4SF4P48230 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.18■□□□□ 0.34
TM4SF4P48230 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TM4SF4P48230 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TM4SF4P48230 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TM4SF4P48230 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.18■□□□□ 0.34
TM4SF4P48230 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TM4SF4P48230 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TM4SF4P48230 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC17.18■□□□□ 0.34
TM4SF4P48230 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
TM4SF4P48230 AC084752.1-201ENST00000509766 622 ntBASIC17.18■□□□□ 0.34
TM4SF4P48230 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TM4SF4P48230 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC17.18■□□□□ 0.34
TM4SF4P48230 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC17.18■□□□□ 0.34
TM4SF4P48230 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC17.18■□□□□ 0.34
TM4SF4P48230 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC17.18■□□□□ 0.34
TM4SF4P48230 MIR3180-2-201ENST00000581748 88 ntBASIC17.18■□□□□ 0.34
TM4SF4P48230 DGAT2L7P-201ENST00000602462 744 ntBASIC17.18■□□□□ 0.34
TM4SF4P48230 AC007326.1-201ENST00000604539 458 ntBASIC17.18■□□□□ 0.34
TM4SF4P48230 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC17.18■□□□□ 0.34
TM4SF4P48230 AC002472.4-201ENST00000641915 272 ntBASIC17.18■□□□□ 0.34
TM4SF4P48230 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.18■□□□□ 0.34
TM4SF4P48230 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TM4SF4P48230 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TM4SF4P48230 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
TM4SF4P48230 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TM4SF4P48230 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TM4SF4P48230 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC17.18■□□□□ 0.34
TM4SF4P48230 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TM4SF4P48230 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TM4SF4P48230 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TM4SF4P48230 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TM4SF4P48230 FLJ38576-201ENST00000623820 2459 ntBASIC17.18■□□□□ 0.34
TM4SF4P48230 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.17■□□□□ 0.34
TM4SF4P48230 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
TM4SF4P48230 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TM4SF4P48230 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TM4SF4P48230 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TM4SF4P48230 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TM4SF4P48230 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TM4SF4P48230 HLA-DMA-203ENST00000395305 777 ntBASIC17.17■□□□□ 0.34
TM4SF4P48230 HCG27-204ENST00000424675 895 ntTSL 3 BASIC17.17■□□□□ 0.34
TM4SF4P48230 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TM4SF4P48230 TSPY25P-201ENST00000429463 745 ntBASIC17.17■□□□□ 0.34
TM4SF4P48230 GCSHP3-201ENST00000431120 391 ntBASIC17.17■□□□□ 0.34
TM4SF4P48230 XBP1P1-201ENST00000436573 652 ntBASIC17.17■□□□□ 0.34
TM4SF4P48230 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC17.17■□□□□ 0.34
TM4SF4P48230 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC17.17■□□□□ 0.34
TM4SF4P48230 CICP12-201ENST00000455801 843 ntBASIC17.17■□□□□ 0.34
TM4SF4P48230 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TM4SF4P48230 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TM4SF4P48230 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.17■□□□□ 0.34
TM4SF4P48230 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TM4SF4P48230 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC17.17■□□□□ 0.34
TM4SF4P48230 RPS15-202ENST00000585665 467 ntTSL 3 BASIC17.17■□□□□ 0.34
TM4SF4P48230 DBP-202ENST00000593500 712 ntTSL 2 BASIC17.17■□□□□ 0.34
TM4SF4P48230 AL137783.1-201ENST00000623494 1896 ntBASIC17.17■□□□□ 0.34
TM4SF4P48230 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TM4SF4P48230 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TM4SF4P48230 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.17■□□□□ 0.34
TM4SF4P48230 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.17■□□□□ 0.34
TM4SF4P48230 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.17■□□□□ 0.34
TM4SF4P48230 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TM4SF4P48230 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms