Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
CEACAM3P40198 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CEACAM3P40198 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC12.66□□□□□ -0.38
CEACAM3P40198 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
CEACAM3P40198 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC12.65□□□□□ -0.38
CEACAM3P40198 AC104640.1-201ENST00000562617 2109 ntBASIC12.65□□□□□ -0.38
CEACAM3P40198 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC12.65□□□□□ -0.38
CEACAM3P40198 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
CEACAM3P40198 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CEACAM3P40198 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CEACAM3P40198 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CEACAM3P40198 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
CEACAM3P40198 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC12.65□□□□□ -0.38
CEACAM3P40198 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CEACAM3P40198 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CEACAM3P40198 PID1-202ENST00000392054 2745 ntTSL 2 BASIC12.65□□□□□ -0.38
CEACAM3P40198 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
CEACAM3P40198 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CEACAM3P40198 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC12.65□□□□□ -0.38
CEACAM3P40198 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CEACAM3P40198 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
CEACAM3P40198 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
CEACAM3P40198 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CEACAM3P40198 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC12.65□□□□□ -0.38
CEACAM3P40198 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CEACAM3P40198 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CEACAM3P40198 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC12.65□□□□□ -0.38
CEACAM3P40198 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CEACAM3P40198 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC12.65□□□□□ -0.38
CEACAM3P40198 PIN1P1-201ENST00000412108 996 ntBASIC12.65□□□□□ -0.38
CEACAM3P40198 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CEACAM3P40198 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC12.65□□□□□ -0.38
CEACAM3P40198 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC12.65□□□□□ -0.38
CEACAM3P40198 HMGN1P19-201ENST00000436976 333 ntBASIC12.65□□□□□ -0.38
CEACAM3P40198 SPTLC1P1-201ENST00000447199 261 ntBASIC12.65□□□□□ -0.38
CEACAM3P40198 UGT1A2P-201ENST00000454886 866 ntBASIC12.65□□□□□ -0.38
CEACAM3P40198 SERBP1P5-201ENST00000510079 1181 ntBASIC12.65□□□□□ -0.38
CEACAM3P40198 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC12.65□□□□□ -0.38
CEACAM3P40198 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC12.65□□□□□ -0.38
CEACAM3P40198 COQ6-210ENST00000554920 649 ntTSL 3 BASIC12.65□□□□□ -0.38
CEACAM3P40198 AC027307.3-201ENST00000594262 1100 ntBASIC12.65□□□□□ -0.38
CEACAM3P40198 AC000095.1-201ENST00000603208 874 ntBASIC12.65□□□□□ -0.38
CEACAM3P40198 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC12.65□□□□□ -0.38
CEACAM3P40198 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC12.65□□□□□ -0.38
CEACAM3P40198 AL158212.4-201ENST00000624062 1286 ntBASIC12.65□□□□□ -0.38
CEACAM3P40198 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC12.65□□□□□ -0.38
CEACAM3P40198 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC12.65□□□□□ -0.38
CEACAM3P40198 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC12.65□□□□□ -0.38
CEACAM3P40198 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CEACAM3P40198 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CEACAM3P40198 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
CEACAM3P40198 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC12.65□□□□□ -0.38
CEACAM3P40198 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CEACAM3P40198 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CEACAM3P40198 WARS-232ENST00000556645 2508 ntTSL 5 BASIC12.65□□□□□ -0.38
CEACAM3P40198 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CEACAM3P40198 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
CEACAM3P40198 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
CEACAM3P40198 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CEACAM3P40198 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC12.65□□□□□ -0.38
CEACAM3P40198 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CEACAM3P40198 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
CEACAM3P40198 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CEACAM3P40198 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CEACAM3P40198 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CEACAM3P40198 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC12.65□□□□□ -0.38
CEACAM3P40198 AC007541.1-201ENST00000570282 1469 ntBASIC12.65□□□□□ -0.38
CEACAM3P40198 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC12.65□□□□□ -0.39
CEACAM3P40198 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
CEACAM3P40198 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC12.65□□□□□ -0.39
CEACAM3P40198 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
CEACAM3P40198 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CEACAM3P40198 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CEACAM3P40198 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CEACAM3P40198 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CEACAM3P40198 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CEACAM3P40198 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CEACAM3P40198 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC12.64□□□□□ -0.39
CEACAM3P40198 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CEACAM3P40198 AC105917.1-201ENST00000506637 2539 ntBASIC12.64□□□□□ -0.39
CEACAM3P40198 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CEACAM3P40198 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CEACAM3P40198 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CEACAM3P40198 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC12.64□□□□□ -0.39
CEACAM3P40198 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CEACAM3P40198 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CEACAM3P40198 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CEACAM3P40198 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC12.64□□□□□ -0.39
CEACAM3P40198 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC12.64□□□□□ -0.39
CEACAM3P40198 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CEACAM3P40198 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CEACAM3P40198 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CEACAM3P40198 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CEACAM3P40198 AC002472.2-201ENST00000442739 958 ntBASIC12.64□□□□□ -0.39
CEACAM3P40198 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CEACAM3P40198 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC12.64□□□□□ -0.39
CEACAM3P40198 RN7SL204P-201ENST00000582831 262 ntBASIC12.64□□□□□ -0.39
CEACAM3P40198 AL132655.2-201ENST00000596276 594 ntBASIC12.64□□□□□ -0.39
CEACAM3P40198 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC12.64□□□□□ -0.39
CEACAM3P40198 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms