Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
HMGCLP35914 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.34■□□□□ 0.05
HMGCLP35914 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HMGCLP35914 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.33■□□□□ 0.05
HMGCLP35914 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.33■□□□□ 0.05
HMGCLP35914 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
HMGCLP35914 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
HMGCLP35914 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.33■□□□□ 0.05
HMGCLP35914 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.33■□□□□ 0.04
HMGCLP35914 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
HMGCLP35914 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HMGCLP35914 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HMGCLP35914 AGAP7P-201ENST00000582299 2062 ntBASIC15.33■□□□□ 0.04
HMGCLP35914 AGAP14-201ENST00000624701 2060 ntBASIC15.33■□□□□ 0.04
HMGCLP35914 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
HMGCLP35914 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
HMGCLP35914 AC006058.4-201ENST00000624016 1670 ntBASIC15.33■□□□□ 0.04
HMGCLP35914 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.33■□□□□ 0.04
HMGCLP35914 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HMGCLP35914 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
HMGCLP35914 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
HMGCLP35914 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
HMGCLP35914 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HMGCLP35914 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.33■□□□□ 0.04
HMGCLP35914 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.33■□□□□ 0.04
HMGCLP35914 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HMGCLP35914 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.33■□□□□ 0.04
HMGCLP35914 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
HMGCLP35914 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.33■□□□□ 0.04
HMGCLP35914 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.33■□□□□ 0.04
HMGCLP35914 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.33■□□□□ 0.04
HMGCLP35914 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
HMGCLP35914 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.33■□□□□ 0.04
HMGCLP35914 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.33■□□□□ 0.04
HMGCLP35914 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.33■□□□□ 0.04
HMGCLP35914 CU634019.7-201ENST00000624153 1185 ntBASIC15.33■□□□□ 0.04
HMGCLP35914 FP236241.2-201ENST00000624906 1185 ntBASIC15.33■□□□□ 0.04
HMGCLP35914 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.33■□□□□ 0.04
HMGCLP35914 AL358472.5-202ENST00000641448 1267 ntBASIC15.33■□□□□ 0.04
HMGCLP35914 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
HMGCLP35914 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HMGCLP35914 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.33■□□□□ 0.04
HMGCLP35914 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.33■□□□□ 0.04
HMGCLP35914 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
HMGCLP35914 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HMGCLP35914 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HMGCLP35914 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HMGCLP35914 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HMGCLP35914 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
HMGCLP35914 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
HMGCLP35914 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
HMGCLP35914 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HMGCLP35914 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HMGCLP35914 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HMGCLP35914 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.33■□□□□ 0.04
HMGCLP35914 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
HMGCLP35914 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
HMGCLP35914 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMGCLP35914 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMGCLP35914 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMGCLP35914 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMGCLP35914 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.32■□□□□ 0.04
HMGCLP35914 FER1L4-210ENST00000615531 5998 ntBASIC15.32■□□□□ 0.04
HMGCLP35914 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMGCLP35914 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMGCLP35914 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMGCLP35914 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMGCLP35914 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMGCLP35914 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMGCLP35914 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
HMGCLP35914 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMGCLP35914 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HMGCLP35914 TCAF2P1-201ENST00000291129 2421 ntBASIC15.32■□□□□ 0.04
HMGCLP35914 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
HMGCLP35914 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMGCLP35914 ACKR1-201ENST00000368121 1240 ntBASIC15.32■□□□□ 0.04
HMGCLP35914 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
HMGCLP35914 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HMGCLP35914 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMGCLP35914 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HMGCLP35914 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
HMGCLP35914 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.32■□□□□ 0.04
HMGCLP35914 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HMGCLP35914 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.32■□□□□ 0.04
HMGCLP35914 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HMGCLP35914 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.32■□□□□ 0.04
HMGCLP35914 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
HMGCLP35914 AC005252.2-201ENST00000624630 1141 ntBASIC15.32■□□□□ 0.04
HMGCLP35914 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.32■□□□□ 0.04
HMGCLP35914 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HMGCLP35914 ZBED1P1-201ENST00000502364 1930 ntBASIC15.32■□□□□ 0.04
HMGCLP35914 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMGCLP35914 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMGCLP35914 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMGCLP35914 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HMGCLP35914 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HMGCLP35914 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.32■□□□□ 0.04
HMGCLP35914 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HMGCLP35914 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HMGCLP35914 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms