Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PTPN6P29350 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PTPN6P29350 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PTPN6P29350 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PTPN6P29350 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.68□□□□□ -0.06
PTPN6P29350 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PTPN6P29350 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PTPN6P29350 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.68□□□□□ -0.06
PTPN6P29350 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
PTPN6P29350 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
PTPN6P29350 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PTPN6P29350 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PTPN6P29350 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PTPN6P29350 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PTPN6P29350 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.68□□□□□ -0.06
PTPN6P29350 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.68□□□□□ -0.06
PTPN6P29350 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.68□□□□□ -0.06
PTPN6P29350 AL080243.2-201ENST00000418783 582 ntBASIC14.68□□□□□ -0.06
PTPN6P29350 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.68□□□□□ -0.06
PTPN6P29350 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.68□□□□□ -0.06
PTPN6P29350 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
PTPN6P29350 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PTPN6P29350 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
PTPN6P29350 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.68□□□□□ -0.06
PTPN6P29350 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
PTPN6P29350 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.68□□□□□ -0.06
PTPN6P29350 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.68□□□□□ -0.06
PTPN6P29350 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PTPN6P29350 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.68□□□□□ -0.06
PTPN6P29350 TEX28P1-201ENST00000613479 1221 ntBASIC14.68□□□□□ -0.06
PTPN6P29350 TEX28P2-201ENST00000617764 1221 ntBASIC14.68□□□□□ -0.06
PTPN6P29350 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.68□□□□□ -0.06
PTPN6P29350 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
PTPN6P29350 AL590560.3-201ENST00000623350 461 ntBASIC14.68□□□□□ -0.06
PTPN6P29350 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.68□□□□□ -0.06
PTPN6P29350 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
PTPN6P29350 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PTPN6P29350 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PTPN6P29350 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
PTPN6P29350 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
PTPN6P29350 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PTPN6P29350 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.68□□□□□ -0.06
PTPN6P29350 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PTPN6P29350 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PTPN6P29350 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
PTPN6P29350 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PTPN6P29350 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PTPN6P29350 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
PTPN6P29350 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
PTPN6P29350 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PTPN6P29350 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PTPN6P29350 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PTPN6P29350 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
PTPN6P29350 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PTPN6P29350 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
PTPN6P29350 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
PTPN6P29350 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PTPN6P29350 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.67□□□□□ -0.06
PTPN6P29350 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
PTPN6P29350 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.67□□□□□ -0.06
PTPN6P29350 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PTPN6P29350 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
PTPN6P29350 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PTPN6P29350 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.67□□□□□ -0.06
PTPN6P29350 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.67□□□□□ -0.06
PTPN6P29350 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PTPN6P29350 TSSK5P-201ENST00000423978 907 ntBASIC14.67□□□□□ -0.06
PTPN6P29350 KRT18P64-201ENST00000434946 1219 ntBASIC14.67□□□□□ -0.06
PTPN6P29350 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PTPN6P29350 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.67□□□□□ -0.06
PTPN6P29350 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.67□□□□□ -0.06
PTPN6P29350 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.67□□□□□ -0.06
PTPN6P29350 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.67□□□□□ -0.06
PTPN6P29350 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PTPN6P29350 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.67□□□□□ -0.06
PTPN6P29350 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PTPN6P29350 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PTPN6P29350 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.67□□□□□ -0.06
PTPN6P29350 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.67□□□□□ -0.06
PTPN6P29350 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.67□□□□□ -0.06
PTPN6P29350 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PTPN6P29350 AC015910.1-201ENST00000579400 975 ntBASIC14.67□□□□□ -0.06
PTPN6P29350 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.67□□□□□ -0.06
PTPN6P29350 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.67□□□□□ -0.06
PTPN6P29350 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.67□□□□□ -0.06
PTPN6P29350 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PTPN6P29350 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
PTPN6P29350 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
PTPN6P29350 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
PTPN6P29350 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.67□□□□□ -0.06
PTPN6P29350 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.67□□□□□ -0.06
PTPN6P29350 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PTPN6P29350 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.67□□□□□ -0.06
PTPN6P29350 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.67□□□□□ -0.06
PTPN6P29350 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.67□□□□□ -0.06
PTPN6P29350 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
PTPN6P29350 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PTPN6P29350 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.66□□□□□ -0.06
PTPN6P29350 Z97205.2-201ENST00000564697 1639 ntBASIC14.66□□□□□ -0.06
PTPN6P29350 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms