Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.93□□□□□ -0.02
CAPN3P20807 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.93□□□□□ -0.02
CAPN3P20807 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CAPN3P20807 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CAPN3P20807 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.93□□□□□ -0.02
CAPN3P20807 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CAPN3P20807 LINC01225-203ENST00000563550 1244 ntBASIC14.93□□□□□ -0.02
CAPN3P20807 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.93□□□□□ -0.02
CAPN3P20807 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.93□□□□□ -0.02
CAPN3P20807 AC026979.3-201ENST00000607315 403 ntBASIC14.93□□□□□ -0.02
CAPN3P20807 MIR6752-201ENST00000618442 71 ntBASIC14.93□□□□□ -0.02
CAPN3P20807 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
CAPN3P20807 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.93□□□□□ -0.02
CAPN3P20807 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
CAPN3P20807 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CAPN3P20807 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.93□□□□□ -0.02
CAPN3P20807 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CAPN3P20807 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
CAPN3P20807 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CAPN3P20807 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CAPN3P20807 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.93□□□□□ -0.02
CAPN3P20807 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CAPN3P20807 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CAPN3P20807 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CAPN3P20807 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CAPN3P20807 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CAPN3P20807 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CAPN3P20807 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
CAPN3P20807 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CAPN3P20807 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CAPN3P20807 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CAPN3P20807 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.93□□□□□ -0.02
CAPN3P20807 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.93□□□□□ -0.02
CAPN3P20807 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CAPN3P20807 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CAPN3P20807 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CAPN3P20807 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CAPN3P20807 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.92□□□□□ -0.02
CAPN3P20807 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CAPN3P20807 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.92□□□□□ -0.02
CAPN3P20807 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CAPN3P20807 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CAPN3P20807 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CAPN3P20807 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CAPN3P20807 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CAPN3P20807 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CAPN3P20807 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CAPN3P20807 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CAPN3P20807 CICP4-201ENST00000447359 2812 ntBASIC14.92□□□□□ -0.02
CAPN3P20807 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.92□□□□□ -0.02
CAPN3P20807 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CAPN3P20807 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CAPN3P20807 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CAPN3P20807 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CAPN3P20807 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.92□□□□□ -0.02
CAPN3P20807 AC236430.1-201ENST00000402231 743 ntBASIC14.92□□□□□ -0.02
CAPN3P20807 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.92□□□□□ -0.02
CAPN3P20807 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.92□□□□□ -0.02
CAPN3P20807 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.92□□□□□ -0.02
CAPN3P20807 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.92□□□□□ -0.02
CAPN3P20807 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.92□□□□□ -0.02
CAPN3P20807 RN7SL589P-201ENST00000481268 310 ntBASIC14.92□□□□□ -0.02
CAPN3P20807 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.92□□□□□ -0.02
CAPN3P20807 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.92□□□□□ -0.02
CAPN3P20807 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CAPN3P20807 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC14.92□□□□□ -0.02
CAPN3P20807 DUX4L27-201ENST00000554796 1261 ntBASIC14.92□□□□□ -0.02
CAPN3P20807 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC14.92□□□□□ -0.02
CAPN3P20807 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.92□□□□□ -0.02
CAPN3P20807 AL390955.2-201ENST00000603032 514 ntBASIC14.92□□□□□ -0.02
CAPN3P20807 AL008721.1-201ENST00000609964 604 ntBASIC14.92□□□□□ -0.02
CAPN3P20807 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CAPN3P20807 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
CAPN3P20807 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
CAPN3P20807 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CAPN3P20807 REXO1L2P-201ENST00000425429 2069 ntBASIC14.92□□□□□ -0.02
CAPN3P20807 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CAPN3P20807 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CAPN3P20807 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.92□□□□□ -0.02
CAPN3P20807 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CAPN3P20807 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CAPN3P20807 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CAPN3P20807 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.92□□□□□ -0.02
CAPN3P20807 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.92□□□□□ -0.02
CAPN3P20807 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CAPN3P20807 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.92□□□□□ -0.02
CAPN3P20807 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CAPN3P20807 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CAPN3P20807 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CAPN3P20807 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CAPN3P20807 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CAPN3P20807 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CAPN3P20807 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CAPN3P20807 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CAPN3P20807 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CAPN3P20807 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CAPN3P20807 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CAPN3P20807 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CAPN3P20807 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CAPN3P20807 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms