Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 AC004987.2-201ENST00000395959 1148 ntBASIC13.78□□□□□ -0.2
ERCC1P07992 AC236430.1-201ENST00000402231 743 ntBASIC13.78□□□□□ -0.2
ERCC1P07992 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ERCC1P07992 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC13.78□□□□□ -0.2
ERCC1P07992 AC002472.2-201ENST00000442739 958 ntBASIC13.78□□□□□ -0.2
ERCC1P07992 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC13.78□□□□□ -0.2
ERCC1P07992 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.78□□□□□ -0.2
ERCC1P07992 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC13.78□□□□□ -0.2
ERCC1P07992 YTHDF3-AS1-201ENST00000603538 718 ntBASIC13.78□□□□□ -0.2
ERCC1P07992 AC008761.3-201ENST00000624803 892 ntBASIC13.78□□□□□ -0.2
ERCC1P07992 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ERCC1P07992 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ERCC1P07992 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ERCC1P07992 AC087499.5-201ENST00000452760 1342 ntBASIC13.78□□□□□ -0.2
ERCC1P07992 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
ERCC1P07992 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ERCC1P07992 AL691432.1-201ENST00000596308 1422 ntBASIC13.78□□□□□ -0.2
ERCC1P07992 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ERCC1P07992 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ERCC1P07992 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.78□□□□□ -0.2
ERCC1P07992 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ERCC1P07992 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
ERCC1P07992 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.78□□□□□ -0.2
ERCC1P07992 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.78□□□□□ -0.2
ERCC1P07992 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
ERCC1P07992 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
ERCC1P07992 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
ERCC1P07992 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
ERCC1P07992 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.78□□□□□ -0.2
ERCC1P07992 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ERCC1P07992 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ERCC1P07992 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ERCC1P07992 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.78□□□□□ -0.2
ERCC1P07992 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ERCC1P07992 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
ERCC1P07992 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
ERCC1P07992 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.77□□□□□ -0.2
ERCC1P07992 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.2
ERCC1P07992 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
ERCC1P07992 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
ERCC1P07992 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
ERCC1P07992 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.2
ERCC1P07992 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ERCC1P07992 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.77□□□□□ -0.21
ERCC1P07992 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ERCC1P07992 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
ERCC1P07992 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ERCC1P07992 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ERCC1P07992 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ERCC1P07992 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.77□□□□□ -0.21
ERCC1P07992 CALY-203ENST00000368558 825 ntTSL 5 BASIC13.77□□□□□ -0.21
ERCC1P07992 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.77□□□□□ -0.21
ERCC1P07992 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ERCC1P07992 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ERCC1P07992 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ERCC1P07992 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ERCC1P07992 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ERCC1P07992 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.77□□□□□ -0.21
ERCC1P07992 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
ERCC1P07992 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC13.77□□□□□ -0.21
ERCC1P07992 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.77□□□□□ -0.21
ERCC1P07992 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
ERCC1P07992 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ERCC1P07992 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC13.77□□□□□ -0.21
ERCC1P07992 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.77□□□□□ -0.21
ERCC1P07992 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.77□□□□□ -0.21
ERCC1P07992 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
ERCC1P07992 AL079307.3-201ENST00000556114 283 ntBASIC13.77□□□□□ -0.21
ERCC1P07992 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ERCC1P07992 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.77□□□□□ -0.21
ERCC1P07992 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.77□□□□□ -0.21
ERCC1P07992 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ERCC1P07992 LINC02560-201ENST00000596379 459 ntBASIC13.77□□□□□ -0.21
ERCC1P07992 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
ERCC1P07992 MIR6069-201ENST00000620069 79 ntBASIC13.77□□□□□ -0.21
ERCC1P07992 LINC01101-201ENST00000622953 1884 ntBASIC13.77□□□□□ -0.21
ERCC1P07992 C18orf15-201ENST00000623680 2534 ntBASIC13.77□□□□□ -0.21
ERCC1P07992 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
ERCC1P07992 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ERCC1P07992 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ERCC1P07992 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
ERCC1P07992 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
ERCC1P07992 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ERCC1P07992 SNX18-202ENST00000343017 3140 ntBASIC13.77□□□□□ -0.21
ERCC1P07992 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
ERCC1P07992 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ERCC1P07992 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
ERCC1P07992 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.77□□□□□ -0.21
ERCC1P07992 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ERCC1P07992 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.76□□□□□ -0.21
ERCC1P07992 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ERCC1P07992 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ERCC1P07992 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ERCC1P07992 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ERCC1P07992 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ERCC1P07992 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ERCC1P07992 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ERCC1P07992 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ERCC1P07992 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ERCC1P07992 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms