Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
RB1P06400 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RB1P06400 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
RB1P06400 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RB1P06400 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RB1P06400 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RB1P06400 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
RB1P06400 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.17■□□□□ 0.18
RB1P06400 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RB1P06400 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RB1P06400 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
RB1P06400 AC018695.7-201ENST00000624587 2492 ntBASIC16.17■□□□□ 0.18
RB1P06400 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.17■□□□□ 0.18
RB1P06400 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
RB1P06400 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RB1P06400 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
RB1P06400 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.16■□□□□ 0.18
RB1P06400 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RB1P06400 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
RB1P06400 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
RB1P06400 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RB1P06400 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
RB1P06400 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RB1P06400 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
RB1P06400 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.16■□□□□ 0.18
RB1P06400 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.16■□□□□ 0.18
RB1P06400 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RB1P06400 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.16■□□□□ 0.18
RB1P06400 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RB1P06400 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RB1P06400 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RB1P06400 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RB1P06400 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC16.16■□□□□ 0.18
RB1P06400 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC16.16■□□□□ 0.18
RB1P06400 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC16.16■□□□□ 0.18
RB1P06400 FAM58BP-201ENST00000439056 645 ntBASIC16.16■□□□□ 0.18
RB1P06400 HNRNPA1P36-201ENST00000521313 955 ntBASIC16.16■□□□□ 0.18
RB1P06400 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC16.16■□□□□ 0.18
RB1P06400 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RB1P06400 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RB1P06400 AC018635.2-201ENST00000608625 364 ntBASIC16.16■□□□□ 0.18
RB1P06400 AC090164.2-201ENST00000611487 516 ntBASIC16.16■□□□□ 0.18
RB1P06400 AF254983.2-201ENST00000612331 135 ntBASIC16.16■□□□□ 0.18
RB1P06400 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RB1P06400 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RB1P06400 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
RB1P06400 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC16.16■□□□□ 0.18
RB1P06400 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RB1P06400 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RB1P06400 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RB1P06400 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC16.16■□□□□ 0.18
RB1P06400 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RB1P06400 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RB1P06400 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RB1P06400 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RB1P06400 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RB1P06400 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
RB1P06400 FKBP4P6-201ENST00000457486 1332 ntBASIC16.16■□□□□ 0.18
RB1P06400 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RB1P06400 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RB1P06400 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
RB1P06400 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RB1P06400 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RB1P06400 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
RB1P06400 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RB1P06400 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RB1P06400 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.15■□□□□ 0.18
RB1P06400 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RB1P06400 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
RB1P06400 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RB1P06400 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RB1P06400 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC16.15■□□□□ 0.18
RB1P06400 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RB1P06400 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RB1P06400 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC16.15■□□□□ 0.18
RB1P06400 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RB1P06400 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RB1P06400 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RB1P06400 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
RB1P06400 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RB1P06400 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RB1P06400 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC16.15■□□□□ 0.18
RB1P06400 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RB1P06400 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.15■□□□□ 0.18
RB1P06400 GHSR-202ENST00000427970 912 ntBASIC16.15■□□□□ 0.18
RB1P06400 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RB1P06400 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC16.15■□□□□ 0.18
RB1P06400 CDC23-208ENST00000505120 455 ntTSL 3 BASIC16.15■□□□□ 0.18
RB1P06400 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC16.15■□□□□ 0.18
RB1P06400 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC16.15■□□□□ 0.18
RB1P06400 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC16.15■□□□□ 0.18
RB1P06400 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RB1P06400 AC100827.2-201ENST00000563214 1194 ntBASIC16.15■□□□□ 0.18
RB1P06400 AP000346.4-201ENST00000614827 381 ntBASIC16.15■□□□□ 0.18
RB1P06400 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.15■□□□□ 0.18
RB1P06400 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RB1P06400 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RB1P06400 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RB1P06400 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC16.15■□□□□ 0.18
RB1P06400 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms