Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
TCRAP04437 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TCRAP04437 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC11.81□□□□□ -0.52
TCRAP04437 AKAP8P1-201ENST00000434743 1349 ntBASIC11.81□□□□□ -0.52
TCRAP04437 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC11.81□□□□□ -0.52
TCRAP04437 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
TCRAP04437 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
TCRAP04437 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
TCRAP04437 AC136759.1-202ENST00000530858 2194 ntBASIC11.81□□□□□ -0.52
TCRAP04437 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
TCRAP04437 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
TCRAP04437 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC11.81□□□□□ -0.52
TCRAP04437 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC11.81□□□□□ -0.52
TCRAP04437 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
TCRAP04437 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TCRAP04437 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC11.81□□□□□ -0.52
TCRAP04437 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC11.81□□□□□ -0.52
TCRAP04437 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TCRAP04437 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC11.8□□□□□ -0.52
TCRAP04437 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TCRAP04437 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
TCRAP04437 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TCRAP04437 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TCRAP04437 BEND3P1-201ENST00000421591 1944 ntBASIC11.8□□□□□ -0.52
TCRAP04437 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC11.8□□□□□ -0.52
TCRAP04437 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
TCRAP04437 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC11.8□□□□□ -0.52
TCRAP04437 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TCRAP04437 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
TCRAP04437 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
TCRAP04437 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TCRAP04437 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
TCRAP04437 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
TCRAP04437 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TCRAP04437 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
TCRAP04437 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
TCRAP04437 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
TCRAP04437 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TCRAP04437 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TCRAP04437 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TCRAP04437 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
TCRAP04437 HLA-H-201ENST00000383620 1096 ntBASIC11.8□□□□□ -0.52
TCRAP04437 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
TCRAP04437 AC074386.1-202ENST00000463561 864 ntBASIC11.8□□□□□ -0.52
TCRAP04437 PPIE-208ENST00000470213 927 ntTSL 3 BASIC11.8□□□□□ -0.52
TCRAP04437 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC11.8□□□□□ -0.52
TCRAP04437 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC11.8□□□□□ -0.52
TCRAP04437 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC11.8□□□□□ -0.52
TCRAP04437 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TCRAP04437 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC11.8□□□□□ -0.52
TCRAP04437 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC11.8□□□□□ -0.52
TCRAP04437 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TCRAP04437 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC11.8□□□□□ -0.52
TCRAP04437 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TCRAP04437 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TCRAP04437 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TCRAP04437 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC11.8□□□□□ -0.52
TCRAP04437 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TCRAP04437 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TCRAP04437 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TCRAP04437 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TCRAP04437 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC11.8□□□□□ -0.52
TCRAP04437 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TCRAP04437 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
TCRAP04437 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
TCRAP04437 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC11.8□□□□□ -0.52
TCRAP04437 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
TCRAP04437 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC11.79□□□□□ -0.52
TCRAP04437 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
TCRAP04437 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC11.79□□□□□ -0.52
TCRAP04437 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
TCRAP04437 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC11.79□□□□□ -0.52
TCRAP04437 AC097359.2-201ENST00000604992 2389 ntBASIC11.79□□□□□ -0.52
TCRAP04437 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TCRAP04437 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
TCRAP04437 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
TCRAP04437 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC11.79□□□□□ -0.52
TCRAP04437 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TCRAP04437 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC11.79□□□□□ -0.52
TCRAP04437 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC11.79□□□□□ -0.52
TCRAP04437 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TCRAP04437 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC11.79□□□□□ -0.52
TCRAP04437 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
TCRAP04437 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC11.79□□□□□ -0.52
TCRAP04437 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC11.79□□□□□ -0.52
TCRAP04437 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
TCRAP04437 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TCRAP04437 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
TCRAP04437 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TCRAP04437 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
TCRAP04437 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
TCRAP04437 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC11.79□□□□□ -0.52
TCRAP04437 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TCRAP04437 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
TCRAP04437 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC11.79□□□□□ -0.52
TCRAP04437 AZGP1P1-201ENST00000411909 902 ntBASIC11.79□□□□□ -0.52
TCRAP04437 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC11.79□□□□□ -0.52
TCRAP04437 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC11.79□□□□□ -0.52
TCRAP04437 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TCRAP04437 IGHV3-22-201ENST00000520721 359 ntBASIC11.79□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms