Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
VTNP04004 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VTNP04004 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
VTNP04004 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VTNP04004 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VTNP04004 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.82■□□□□ 0.28
VTNP04004 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VTNP04004 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VTNP04004 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
VTNP04004 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VTNP04004 PAUPAR-201ENST00000630360 2965 ntBASIC16.82■□□□□ 0.28
VTNP04004 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VTNP04004 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
VTNP04004 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VTNP04004 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.82■□□□□ 0.28
VTNP04004 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VTNP04004 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VTNP04004 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.82■□□□□ 0.28
VTNP04004 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.82■□□□□ 0.28
VTNP04004 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
VTNP04004 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC16.82■□□□□ 0.28
VTNP04004 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC16.82■□□□□ 0.28
VTNP04004 FAM86HP-204ENST00000513466 959 ntBASIC16.82■□□□□ 0.28
VTNP04004 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.82■□□□□ 0.28
VTNP04004 NOP2-211ENST00000540228 668 ntTSL 2 BASIC16.82■□□□□ 0.28
VTNP04004 DERL2-202ENST00000570848 657 ntTSL 5 BASIC16.82■□□□□ 0.28
VTNP04004 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VTNP04004 ENPP7P14-201ENST00000621765 1040 ntBASIC16.82■□□□□ 0.28
VTNP04004 AL359258.3-201ENST00000622910 2331 ntBASIC16.82■□□□□ 0.28
VTNP04004 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VTNP04004 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
VTNP04004 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.82■□□□□ 0.28
VTNP04004 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.82■□□□□ 0.28
VTNP04004 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VTNP04004 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.82■□□□□ 0.28
VTNP04004 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VTNP04004 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VTNP04004 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VTNP04004 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.81■□□□□ 0.28
VTNP04004 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VTNP04004 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VTNP04004 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.81■□□□□ 0.28
VTNP04004 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.81■□□□□ 0.28
VTNP04004 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
VTNP04004 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.81■□□□□ 0.28
VTNP04004 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
VTNP04004 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VTNP04004 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC16.81■□□□□ 0.28
VTNP04004 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VTNP04004 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VTNP04004 AL157414.3-201ENST00000624276 1954 ntBASIC16.81■□□□□ 0.28
VTNP04004 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VTNP04004 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VTNP04004 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
VTNP04004 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VTNP04004 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VTNP04004 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
VTNP04004 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
VTNP04004 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
VTNP04004 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VTNP04004 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC16.81■□□□□ 0.28
VTNP04004 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
VTNP04004 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC16.81■□□□□ 0.28
VTNP04004 AC091271.1-201ENST00000611877 1162 ntBASIC16.81■□□□□ 0.28
VTNP04004 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
VTNP04004 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VTNP04004 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
VTNP04004 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
VTNP04004 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VTNP04004 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VTNP04004 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VTNP04004 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
VTNP04004 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
VTNP04004 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC16.81■□□□□ 0.28
VTNP04004 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VTNP04004 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
VTNP04004 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
VTNP04004 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
VTNP04004 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.8■□□□□ 0.28
VTNP04004 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VTNP04004 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VTNP04004 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VTNP04004 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VTNP04004 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
VTNP04004 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VTNP04004 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VTNP04004 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VTNP04004 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.8■□□□□ 0.28
VTNP04004 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.8■□□□□ 0.28
VTNP04004 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.8■□□□□ 0.28
VTNP04004 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
VTNP04004 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VTNP04004 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
VTNP04004 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.8■□□□□ 0.28
VTNP04004 MST1L-201ENST00000442552 2185 ntBASIC16.8■□□□□ 0.28
VTNP04004 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
VTNP04004 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VTNP04004 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
VTNP04004 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC16.8■□□□□ 0.28
VTNP04004 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms