Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.66□□□□□ -0.06
MT-ND1P03886 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MT-ND1P03886 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MT-ND1P03886 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
MT-ND1P03886 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.65□□□□□ -0.06
MT-ND1P03886 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
MT-ND1P03886 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
MT-ND1P03886 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
MT-ND1P03886 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
MT-ND1P03886 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
MT-ND1P03886 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.65□□□□□ -0.06
MT-ND1P03886 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
MT-ND1P03886 AC107918.4-201ENST00000641966 3141 ntBASIC14.65□□□□□ -0.06
MT-ND1P03886 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
MT-ND1P03886 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
MT-ND1P03886 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MT-ND1P03886 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
MT-ND1P03886 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MT-ND1P03886 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
MT-ND1P03886 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MT-ND1P03886 AC004987.2-201ENST00000395959 1148 ntBASIC14.65□□□□□ -0.06
MT-ND1P03886 MED15P5-201ENST00000423150 992 ntBASIC14.65□□□□□ -0.06
MT-ND1P03886 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC14.65□□□□□ -0.06
MT-ND1P03886 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
MT-ND1P03886 AC098859.1-201ENST00000502915 1238 ntBASIC14.65□□□□□ -0.06
MT-ND1P03886 AC105233.2-201ENST00000523697 349 ntBASIC14.65□□□□□ -0.06
MT-ND1P03886 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.65□□□□□ -0.06
MT-ND1P03886 SLC25A1P1-201ENST00000528351 927 ntBASIC14.65□□□□□ -0.06
MT-ND1P03886 AF228730.5-201ENST00000530288 346 ntBASIC14.65□□□□□ -0.06
MT-ND1P03886 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
MT-ND1P03886 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.65□□□□□ -0.06
MT-ND1P03886 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.65□□□□□ -0.06
MT-ND1P03886 PIN1-206ENST00000587625 878 ntTSL 2 BASIC14.65□□□□□ -0.06
MT-ND1P03886 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
MT-ND1P03886 AC140113.2-201ENST00000604370 208 ntBASIC14.65□□□□□ -0.06
MT-ND1P03886 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.65□□□□□ -0.06
MT-ND1P03886 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
MT-ND1P03886 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
MT-ND1P03886 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MT-ND1P03886 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
MT-ND1P03886 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
MT-ND1P03886 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
MT-ND1P03886 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.65□□□□□ -0.06
MT-ND1P03886 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
MT-ND1P03886 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
MT-ND1P03886 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.65□□□□□ -0.06
MT-ND1P03886 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
MT-ND1P03886 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
MT-ND1P03886 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
MT-ND1P03886 AKAP8P1-201ENST00000434743 1349 ntBASIC14.65□□□□□ -0.06
MT-ND1P03886 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
MT-ND1P03886 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
MT-ND1P03886 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MT-ND1P03886 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
MT-ND1P03886 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
MT-ND1P03886 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MT-ND1P03886 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
MT-ND1P03886 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
MT-ND1P03886 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.64□□□□□ -0.07
MT-ND1P03886 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MT-ND1P03886 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.64□□□□□ -0.07
MT-ND1P03886 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.64□□□□□ -0.07
MT-ND1P03886 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MT-ND1P03886 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
MT-ND1P03886 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
MT-ND1P03886 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MT-ND1P03886 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
MT-ND1P03886 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MT-ND1P03886 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
MT-ND1P03886 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MT-ND1P03886 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
MT-ND1P03886 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
MT-ND1P03886 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MT-ND1P03886 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MT-ND1P03886 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
MT-ND1P03886 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.64□□□□□ -0.07
MT-ND1P03886 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MT-ND1P03886 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
MT-ND1P03886 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.64□□□□□ -0.07
MT-ND1P03886 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC14.64□□□□□ -0.07
MT-ND1P03886 RPS8P6-201ENST00000426177 609 ntBASIC14.64□□□□□ -0.07
MT-ND1P03886 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.64□□□□□ -0.07
MT-ND1P03886 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MT-ND1P03886 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.64□□□□□ -0.07
MT-ND1P03886 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.64□□□□□ -0.07
MT-ND1P03886 AC024267.1-201ENST00000582320 895 ntBASIC14.64□□□□□ -0.07
MT-ND1P03886 AC120114.3-201ENST00000611923 658 ntBASIC14.64□□□□□ -0.07
MT-ND1P03886 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
MT-ND1P03886 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.64□□□□□ -0.07
MT-ND1P03886 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.64□□□□□ -0.07
MT-ND1P03886 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
MT-ND1P03886 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MT-ND1P03886 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.64□□□□□ -0.07
MT-ND1P03886 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
MT-ND1P03886 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
MT-ND1P03886 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.64□□□□□ -0.07
MT-ND1P03886 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MT-ND1P03886 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MT-ND1P03886 AC018529.2-202ENST00000611482 3087 ntBASIC14.64□□□□□ -0.07
MT-ND1P03886 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms