Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
GGPS1O95749 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GGPS1O95749 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GGPS1O95749 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GGPS1O95749 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
GGPS1O95749 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GGPS1O95749 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GGPS1O95749 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
GGPS1O95749 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC17.27■□□□□ 0.36
GGPS1O95749 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC17.27■□□□□ 0.36
GGPS1O95749 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC17.27■□□□□ 0.36
GGPS1O95749 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.27■□□□□ 0.36
GGPS1O95749 RNA5SP486-201ENST00000515961 83 ntBASIC17.27■□□□□ 0.36
GGPS1O95749 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC17.27■□□□□ 0.36
GGPS1O95749 RN7SL560P-201ENST00000577943 264 ntBASIC17.27■□□□□ 0.36
GGPS1O95749 ETV2-208ENST00000621247 941 ntTSL 5 BASIC17.27■□□□□ 0.36
GGPS1O95749 AL158070.2-201ENST00000623713 1621 ntBASIC17.27■□□□□ 0.36
GGPS1O95749 AC092384.3-202ENST00000564646 2873 ntBASIC17.27■□□□□ 0.36
GGPS1O95749 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
GGPS1O95749 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
GGPS1O95749 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.27■□□□□ 0.35
GGPS1O95749 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
GGPS1O95749 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
GGPS1O95749 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
GGPS1O95749 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
GGPS1O95749 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC17.27■□□□□ 0.35
GGPS1O95749 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
GGPS1O95749 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
GGPS1O95749 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
GGPS1O95749 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.26■□□□□ 0.35
GGPS1O95749 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GGPS1O95749 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GGPS1O95749 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GGPS1O95749 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GGPS1O95749 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17.26■□□□□ 0.35
GGPS1O95749 AL596257.1-201ENST00000641463 2694 ntBASIC17.26■□□□□ 0.35
GGPS1O95749 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.26■□□□□ 0.35
GGPS1O95749 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
GGPS1O95749 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GGPS1O95749 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
GGPS1O95749 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC17.26■□□□□ 0.35
GGPS1O95749 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GGPS1O95749 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GGPS1O95749 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GGPS1O95749 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
GGPS1O95749 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GGPS1O95749 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.26■□□□□ 0.35
GGPS1O95749 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.26■□□□□ 0.35
GGPS1O95749 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC17.26■□□□□ 0.35
GGPS1O95749 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
GGPS1O95749 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GGPS1O95749 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
GGPS1O95749 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
GGPS1O95749 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GGPS1O95749 AC108725.1-201ENST00000495472 409 ntBASIC17.26■□□□□ 0.35
GGPS1O95749 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC17.26■□□□□ 0.35
GGPS1O95749 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC17.26■□□□□ 0.35
GGPS1O95749 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
GGPS1O95749 FAM8A2P-201ENST00000528813 1142 ntBASIC17.26■□□□□ 0.35
GGPS1O95749 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GGPS1O95749 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC17.26■□□□□ 0.35
GGPS1O95749 RIT1-205ENST00000539040 919 ntTSL 2 BASIC17.26■□□□□ 0.35
GGPS1O95749 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GGPS1O95749 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC17.26■□□□□ 0.35
GGPS1O95749 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC17.26■□□□□ 0.35
GGPS1O95749 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
GGPS1O95749 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC17.26■□□□□ 0.35
GGPS1O95749 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC17.26■□□□□ 0.35
GGPS1O95749 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC17.26■□□□□ 0.35
GGPS1O95749 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GGPS1O95749 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GGPS1O95749 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
GGPS1O95749 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
GGPS1O95749 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
GGPS1O95749 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GGPS1O95749 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GGPS1O95749 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
GGPS1O95749 LRRC59-203ENST00000576448 1531 ntBASIC17.26■□□□□ 0.35
GGPS1O95749 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
GGPS1O95749 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
GGPS1O95749 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.26■□□□□ 0.35
GGPS1O95749 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GGPS1O95749 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
GGPS1O95749 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.25■□□□□ 0.35
GGPS1O95749 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GGPS1O95749 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GGPS1O95749 AHCYP2-201ENST00000430630 1300 ntBASIC17.25■□□□□ 0.35
GGPS1O95749 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC17.25■□□□□ 0.35
GGPS1O95749 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
GGPS1O95749 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GGPS1O95749 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
GGPS1O95749 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17.25■□□□□ 0.35
GGPS1O95749 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
GGPS1O95749 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC17.25■□□□□ 0.35
GGPS1O95749 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GGPS1O95749 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
GGPS1O95749 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC17.25■□□□□ 0.35
GGPS1O95749 AL139094.1-201ENST00000405549 1188 ntBASIC17.25■□□□□ 0.35
GGPS1O95749 MIR1202-201ENST00000408529 83 ntBASIC17.25■□□□□ 0.35
GGPS1O95749 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms