Protein–RNA interactions for Protein: O95347

SMC2, Structural maintenance of chromosomes protein 2, humanhuman

Predictions only

Length 1,197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2O95347 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMC2O95347 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMC2O95347 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMC2O95347 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SMC2O95347 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC17.53■□□□□ 0.4
SMC2O95347 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SMC2O95347 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SMC2O95347 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMC2O95347 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMC2O95347 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMC2O95347 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMC2O95347 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMC2O95347 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMC2O95347 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMC2O95347 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMC2O95347 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
SMC2O95347 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMC2O95347 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SMC2O95347 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMC2O95347 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.53■□□□□ 0.4
SMC2O95347 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC17.53■□□□□ 0.4
SMC2O95347 MTND6P24-201ENST00000440466 518 ntBASIC17.53■□□□□ 0.4
SMC2O95347 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.53■□□□□ 0.4
SMC2O95347 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC17.53■□□□□ 0.4
SMC2O95347 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SMC2O95347 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.53■□□□□ 0.4
SMC2O95347 AC026150.2-201ENST00000564693 1156 ntBASIC17.53■□□□□ 0.4
SMC2O95347 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
SMC2O95347 AC004835.2-201ENST00000603762 682 ntBASIC17.53■□□□□ 0.4
SMC2O95347 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SMC2O95347 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMC2O95347 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
SMC2O95347 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMC2O95347 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMC2O95347 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMC2O95347 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMC2O95347 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
SMC2O95347 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMC2O95347 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC17.52■□□□□ 0.4
SMC2O95347 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMC2O95347 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SMC2O95347 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC17.52■□□□□ 0.4
SMC2O95347 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMC2O95347 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMC2O95347 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC17.52■□□□□ 0.4
SMC2O95347 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SMC2O95347 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMC2O95347 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMC2O95347 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SMC2O95347 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SMC2O95347 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMC2O95347 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SMC2O95347 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SMC2O95347 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMC2O95347 AJ011931.1-201ENST00000618749 2492 ntBASIC17.52■□□□□ 0.4
SMC2O95347 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMC2O95347 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.52■□□□□ 0.4
SMC2O95347 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.52■□□□□ 0.4
SMC2O95347 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
SMC2O95347 GPS2P2-201ENST00000430745 888 ntBASIC17.52■□□□□ 0.4
SMC2O95347 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.52■□□□□ 0.4
SMC2O95347 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.52■□□□□ 0.4
SMC2O95347 TARDBPP1-201ENST00000442013 1203 ntBASIC17.52■□□□□ 0.4
SMC2O95347 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SMC2O95347 SPDYE14P-201ENST00000442619 822 ntBASIC17.52■□□□□ 0.4
SMC2O95347 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.52■□□□□ 0.4
SMC2O95347 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMC2O95347 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC17.52■□□□□ 0.4
SMC2O95347 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.52■□□□□ 0.4
SMC2O95347 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.52■□□□□ 0.4
SMC2O95347 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.52■□□□□ 0.4
SMC2O95347 MIR3687-2-201ENST00000577708 61 ntBASIC17.52■□□□□ 0.4
SMC2O95347 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.52■□□□□ 0.4
SMC2O95347 AL671883.3-201ENST00000603274 991 ntBASIC17.52■□□□□ 0.4
SMC2O95347 MIR3687-1-201ENST00000614492 61 ntBASIC17.52■□□□□ 0.4
SMC2O95347 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.52■□□□□ 0.4
SMC2O95347 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
SMC2O95347 ZBED1P1-201ENST00000502364 1930 ntBASIC17.52■□□□□ 0.4
SMC2O95347 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC17.52■□□□□ 0.4
SMC2O95347 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SMC2O95347 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SMC2O95347 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
SMC2O95347 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
SMC2O95347 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.39
SMC2O95347 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SMC2O95347 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
SMC2O95347 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
SMC2O95347 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SMC2O95347 WASH3P-207ENST00000560956 1394 ntBASIC17.52■□□□□ 0.39
SMC2O95347 FO538757.1-201ENST00000623083 1397 ntBASIC17.52■□□□□ 0.39
SMC2O95347 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC17.52■□□□□ 0.39
SMC2O95347 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
SMC2O95347 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SMC2O95347 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SMC2O95347 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMC2O95347 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC17.51■□□□□ 0.39
SMC2O95347 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMC2O95347 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
SMC2O95347 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMC2O95347 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms