Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.85□□□□□ -0.19
CDRT1O95170 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDRT1O95170 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.85□□□□□ -0.19
CDRT1O95170 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDRT1O95170 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
CDRT1O95170 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC13.85□□□□□ -0.19
CDRT1O95170 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDRT1O95170 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CDRT1O95170 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.85□□□□□ -0.19
CDRT1O95170 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDRT1O95170 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CDRT1O95170 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDRT1O95170 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC13.85□□□□□ -0.19
CDRT1O95170 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.85□□□□□ -0.19
CDRT1O95170 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.85□□□□□ -0.19
CDRT1O95170 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDRT1O95170 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDRT1O95170 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC13.85□□□□□ -0.19
CDRT1O95170 FIS1-203ENST00000442303 631 ntTSL 3 BASIC13.85□□□□□ -0.19
CDRT1O95170 HCG4B-203ENST00000450128 991 ntBASIC13.85□□□□□ -0.19
CDRT1O95170 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.85□□□□□ -0.19
CDRT1O95170 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDRT1O95170 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.85□□□□□ -0.19
CDRT1O95170 CD63-210ENST00000550776 870 ntTSL 5 BASIC13.85□□□□□ -0.19
CDRT1O95170 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CDRT1O95170 AL078644.1-201ENST00000609881 752 ntBASIC13.85□□□□□ -0.19
CDRT1O95170 IRF5-214ENST00000613821 595 ntTSL 5 BASIC13.85□□□□□ -0.19
CDRT1O95170 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDRT1O95170 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.85□□□□□ -0.19
CDRT1O95170 AC073439.1-201ENST00000624121 1774 ntBASIC13.85□□□□□ -0.19
CDRT1O95170 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDRT1O95170 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
CDRT1O95170 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDRT1O95170 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDRT1O95170 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDRT1O95170 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.85□□□□□ -0.19
CDRT1O95170 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CDRT1O95170 AC092135.3-201ENST00000624151 1846 ntBASIC13.85□□□□□ -0.19
CDRT1O95170 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDRT1O95170 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDRT1O95170 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.85□□□□□ -0.19
CDRT1O95170 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CDRT1O95170 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CDRT1O95170 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.85□□□□□ -0.19
CDRT1O95170 CICP17-201ENST00000418553 2377 ntBASIC13.85□□□□□ -0.19
CDRT1O95170 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
CDRT1O95170 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CDRT1O95170 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.84□□□□□ -0.19
CDRT1O95170 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDRT1O95170 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CDRT1O95170 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC13.84□□□□□ -0.19
CDRT1O95170 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDRT1O95170 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDRT1O95170 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDRT1O95170 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDRT1O95170 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDRT1O95170 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDRT1O95170 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDRT1O95170 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDRT1O95170 AC004870.1-201ENST00000315132 882 ntBASIC13.84□□□□□ -0.19
CDRT1O95170 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
CDRT1O95170 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDRT1O95170 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDRT1O95170 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDRT1O95170 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CDRT1O95170 RNA5SP415-201ENST00000517246 115 ntBASIC13.84□□□□□ -0.19
CDRT1O95170 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC13.84□□□□□ -0.19
CDRT1O95170 AC109635.5-201ENST00000533593 962 ntBASIC13.84□□□□□ -0.19
CDRT1O95170 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC13.84□□□□□ -0.19
CDRT1O95170 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
CDRT1O95170 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC13.84□□□□□ -0.19
CDRT1O95170 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
CDRT1O95170 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDRT1O95170 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.84□□□□□ -0.19
CDRT1O95170 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDRT1O95170 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CDRT1O95170 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.84□□□□□ -0.19
CDRT1O95170 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDRT1O95170 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDRT1O95170 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDRT1O95170 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDRT1O95170 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDRT1O95170 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDRT1O95170 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDRT1O95170 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CDRT1O95170 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDRT1O95170 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDRT1O95170 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDRT1O95170 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.84□□□□□ -0.19
CDRT1O95170 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
CDRT1O95170 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDRT1O95170 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDRT1O95170 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDRT1O95170 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDRT1O95170 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.84□□□□□ -0.19
CDRT1O95170 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.84□□□□□ -0.19
CDRT1O95170 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CDRT1O95170 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDRT1O95170 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
CDRT1O95170 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms