Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH16O75309 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC15.66■□□□□ 0.1
CDH16O75309 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CDH16O75309 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
CDH16O75309 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDH16O75309 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH16O75309 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDH16O75309 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.66■□□□□ 0.1
CDH16O75309 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.66■□□□□ 0.1
CDH16O75309 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.66■□□□□ 0.1
CDH16O75309 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.66■□□□□ 0.1
CDH16O75309 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDH16O75309 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.66■□□□□ 0.1
CDH16O75309 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.66■□□□□ 0.1
CDH16O75309 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CDH16O75309 AC034105.1-201ENST00000563488 319 ntBASIC15.66■□□□□ 0.1
CDH16O75309 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.66■□□□□ 0.1
CDH16O75309 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH16O75309 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.66■□□□□ 0.1
CDH16O75309 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.66■□□□□ 0.1
CDH16O75309 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDH16O75309 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CDH16O75309 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.66■□□□□ 0.1
CDH16O75309 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDH16O75309 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH16O75309 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDH16O75309 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CDH16O75309 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC15.66■□□□□ 0.1
CDH16O75309 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH16O75309 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CDH16O75309 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.66■□□□□ 0.1
CDH16O75309 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH16O75309 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH16O75309 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH16O75309 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH16O75309 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
CDH16O75309 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC15.65■□□□□ 0.1
CDH16O75309 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CDH16O75309 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH16O75309 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH16O75309 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH16O75309 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH16O75309 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH16O75309 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH16O75309 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH16O75309 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH16O75309 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CDH16O75309 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH16O75309 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH16O75309 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH16O75309 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
CDH16O75309 AC018442.1-201ENST00000421439 2061 ntBASIC15.65■□□□□ 0.1
CDH16O75309 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDH16O75309 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.65■□□□□ 0.1
CDH16O75309 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.65■□□□□ 0.1
CDH16O75309 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CDH16O75309 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.65■□□□□ 0.1
CDH16O75309 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.65■□□□□ 0.1
CDH16O75309 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.65■□□□□ 0.1
CDH16O75309 RNA5SP416-201ENST00000516838 111 ntBASIC15.65■□□□□ 0.1
CDH16O75309 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.65■□□□□ 0.1
CDH16O75309 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.65■□□□□ 0.1
CDH16O75309 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CDH16O75309 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.65■□□□□ 0.1
CDH16O75309 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.65■□□□□ 0.1
CDH16O75309 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
CDH16O75309 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH16O75309 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CDH16O75309 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDH16O75309 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
CDH16O75309 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH16O75309 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH16O75309 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.65■□□□□ 0.1
CDH16O75309 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
CDH16O75309 AC067750.1-201ENST00000608826 6545 ntBASIC15.65■□□□□ 0.1
CDH16O75309 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH16O75309 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDH16O75309 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CDH16O75309 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH16O75309 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH16O75309 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH16O75309 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDH16O75309 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH16O75309 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH16O75309 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.65■□□□□ 0.1
CDH16O75309 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CDH16O75309 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH16O75309 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH16O75309 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
CDH16O75309 AP001267.2-201ENST00000532619 2086 ntBASIC15.64■□□□□ 0.09
CDH16O75309 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH16O75309 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH16O75309 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CDH16O75309 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
CDH16O75309 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.64■□□□□ 0.09
CDH16O75309 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.64■□□□□ 0.09
CDH16O75309 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH16O75309 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.64■□□□□ 0.09
CDH16O75309 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH16O75309 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms