Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGA12O60330 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGA12O60330 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.35■□□□□ 0.05
PCDHGA12O60330 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGA12O60330 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGA12O60330 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.34■□□□□ 0.05
PCDHGA12O60330 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC15.34■□□□□ 0.05
PCDHGA12O60330 MSTO2P-201ENST00000314835 1709 ntBASIC15.34■□□□□ 0.05
PCDHGA12O60330 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.34■□□□□ 0.05
PCDHGA12O60330 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGA12O60330 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGA12O60330 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGA12O60330 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.34■□□□□ 0.05
PCDHGA12O60330 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGA12O60330 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGA12O60330 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
PCDHGA12O60330 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGA12O60330 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.34■□□□□ 0.05
PCDHGA12O60330 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGA12O60330 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.34■□□□□ 0.05
PCDHGA12O60330 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
PCDHGA12O60330 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGA12O60330 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
PCDHGA12O60330 GPAA1P2-201ENST00000417923 928 ntBASIC15.34■□□□□ 0.05
PCDHGA12O60330 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGA12O60330 RPL13AP20-201ENST00000459725 609 ntBASIC15.34■□□□□ 0.05
PCDHGA12O60330 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.34■□□□□ 0.05
PCDHGA12O60330 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGA12O60330 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC15.34■□□□□ 0.05
PCDHGA12O60330 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC15.34■□□□□ 0.05
PCDHGA12O60330 MIR3615-201ENST00000581999 87 ntBASIC15.34■□□□□ 0.05
PCDHGA12O60330 AC093813.1-201ENST00000605066 256 ntBASIC15.34■□□□□ 0.05
PCDHGA12O60330 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.34■□□□□ 0.05
PCDHGA12O60330 AC244669.2-201ENST00000612320 853 ntBASIC15.34■□□□□ 0.05
PCDHGA12O60330 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC15.34■□□□□ 0.05
PCDHGA12O60330 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.34■□□□□ 0.05
PCDHGA12O60330 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGA12O60330 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
PCDHGA12O60330 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGA12O60330 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGA12O60330 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGA12O60330 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGA12O60330 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
PCDHGA12O60330 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGA12O60330 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGA12O60330 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGA12O60330 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGA12O60330 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGA12O60330 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
PCDHGA12O60330 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGA12O60330 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.34■□□□□ 0.05
PCDHGA12O60330 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.34■□□□□ 0.05
PCDHGA12O60330 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.34■□□□□ 0.05
PCDHGA12O60330 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.34■□□□□ 0.05
PCDHGA12O60330 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGA12O60330 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.33■□□□□ 0.05
PCDHGA12O60330 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PCDHGA12O60330 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
PCDHGA12O60330 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
PCDHGA12O60330 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PCDHGA12O60330 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
PCDHGA12O60330 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
PCDHGA12O60330 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.33■□□□□ 0.05
PCDHGA12O60330 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PCDHGA12O60330 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.33■□□□□ 0.05
PCDHGA12O60330 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PCDHGA12O60330 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
PCDHGA12O60330 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
PCDHGA12O60330 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.33■□□□□ 0.05
PCDHGA12O60330 REXO1L1P-202ENST00000608646 1974 ntBASIC15.33■□□□□ 0.05
PCDHGA12O60330 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PCDHGA12O60330 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGA12O60330 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGA12O60330 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.33■□□□□ 0.04
PCDHGA12O60330 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGA12O60330 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGA12O60330 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
PCDHGA12O60330 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGA12O60330 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.33■□□□□ 0.04
PCDHGA12O60330 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGA12O60330 TPO-206ENST00000382269 1155 ntTSL 5 BASIC15.33■□□□□ 0.04
PCDHGA12O60330 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC15.33■□□□□ 0.04
PCDHGA12O60330 CNN2P8-201ENST00000421872 913 ntBASIC15.33■□□□□ 0.04
PCDHGA12O60330 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.33■□□□□ 0.04
PCDHGA12O60330 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.33■□□□□ 0.04
PCDHGA12O60330 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGA12O60330 AC026410.3-201ENST00000514280 936 ntBASIC15.33■□□□□ 0.04
PCDHGA12O60330 AC023310.1-201ENST00000554836 735 ntBASIC15.33■□□□□ 0.04
PCDHGA12O60330 HNRNPUP1-201ENST00000554987 333 ntBASIC15.33■□□□□ 0.04
PCDHGA12O60330 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGA12O60330 AC243960.2-201ENST00000600996 747 ntBASIC15.33■□□□□ 0.04
PCDHGA12O60330 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.33■□□□□ 0.04
PCDHGA12O60330 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGA12O60330 AL139099.5-201ENST00000635274 300 ntBASIC15.33■□□□□ 0.04
PCDHGA12O60330 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.33■□□□□ 0.04
PCDHGA12O60330 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGA12O60330 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGA12O60330 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGA12O60330 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.33■□□□□ 0.04
PCDHGA12O60330 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms