Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.66□□□□□ -0.06
UPK1AO00322 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
UPK1AO00322 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
UPK1AO00322 AC006504.5-208ENST00000588784 2401 ntBASIC14.66□□□□□ -0.06
UPK1AO00322 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
UPK1AO00322 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
UPK1AO00322 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
UPK1AO00322 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
UPK1AO00322 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
UPK1AO00322 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
UPK1AO00322 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.66□□□□□ -0.06
UPK1AO00322 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
UPK1AO00322 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
UPK1AO00322 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.66□□□□□ -0.06
UPK1AO00322 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
UPK1AO00322 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
UPK1AO00322 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
UPK1AO00322 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
UPK1AO00322 ACE3P-201ENST00000423435 1973 ntBASIC14.65□□□□□ -0.06
UPK1AO00322 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
UPK1AO00322 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.65□□□□□ -0.06
UPK1AO00322 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.65□□□□□ -0.06
UPK1AO00322 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
UPK1AO00322 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
UPK1AO00322 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
UPK1AO00322 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
UPK1AO00322 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.65□□□□□ -0.06
UPK1AO00322 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.65□□□□□ -0.06
UPK1AO00322 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
UPK1AO00322 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
UPK1AO00322 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.65□□□□□ -0.06
UPK1AO00322 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
UPK1AO00322 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
UPK1AO00322 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
UPK1AO00322 BX640514.1-201ENST00000583223 1918 ntBASIC14.65□□□□□ -0.06
UPK1AO00322 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
UPK1AO00322 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
UPK1AO00322 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
UPK1AO00322 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
UPK1AO00322 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
UPK1AO00322 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.65□□□□□ -0.06
UPK1AO00322 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.65□□□□□ -0.06
UPK1AO00322 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.65□□□□□ -0.06
UPK1AO00322 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
UPK1AO00322 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.65□□□□□ -0.06
UPK1AO00322 SDHAP3-202ENST00000515467 728 ntBASIC14.65□□□□□ -0.06
UPK1AO00322 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.65□□□□□ -0.06
UPK1AO00322 LINC01115-203ENST00000606068 577 ntBASIC14.65□□□□□ -0.06
UPK1AO00322 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.65□□□□□ -0.06
UPK1AO00322 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.65□□□□□ -0.06
UPK1AO00322 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
UPK1AO00322 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.65□□□□□ -0.06
UPK1AO00322 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
UPK1AO00322 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
UPK1AO00322 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
UPK1AO00322 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
UPK1AO00322 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
UPK1AO00322 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.65□□□□□ -0.06
UPK1AO00322 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
UPK1AO00322 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
UPK1AO00322 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
UPK1AO00322 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
UPK1AO00322 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
UPK1AO00322 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
UPK1AO00322 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.65□□□□□ -0.06
UPK1AO00322 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
UPK1AO00322 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
UPK1AO00322 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
UPK1AO00322 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
UPK1AO00322 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
UPK1AO00322 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
UPK1AO00322 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.65□□□□□ -0.06
UPK1AO00322 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.65□□□□□ -0.06
UPK1AO00322 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UPK1AO00322 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
UPK1AO00322 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UPK1AO00322 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UPK1AO00322 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.64□□□□□ -0.07
UPK1AO00322 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UPK1AO00322 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UPK1AO00322 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
UPK1AO00322 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
UPK1AO00322 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
UPK1AO00322 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.64□□□□□ -0.07
UPK1AO00322 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
UPK1AO00322 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.64□□□□□ -0.07
UPK1AO00322 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UPK1AO00322 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
UPK1AO00322 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.64□□□□□ -0.07
UPK1AO00322 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
UPK1AO00322 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
UPK1AO00322 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.64□□□□□ -0.07
UPK1AO00322 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.64□□□□□ -0.07
UPK1AO00322 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.64□□□□□ -0.07
UPK1AO00322 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.64□□□□□ -0.07
UPK1AO00322 TSSK5P-201ENST00000423978 907 ntBASIC14.64□□□□□ -0.07
UPK1AO00322 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UPK1AO00322 AC241585.1-201ENST00000433527 519 ntBASIC14.64□□□□□ -0.07
UPK1AO00322 AC092183.1-201ENST00000469884 875 ntBASIC14.64□□□□□ -0.07
UPK1AO00322 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms