Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 AMT-204ENST00000427987 1646 ntTSL 5 BASIC19.32■□□□□ 0.68
LOC102724428A0A0B4J2F2 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LOC102724428A0A0B4J2F2 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LOC102724428A0A0B4J2F2 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
LOC102724428A0A0B4J2F2 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LOC102724428A0A0B4J2F2 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LOC102724428A0A0B4J2F2 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC19.31■□□□□ 0.68
LOC102724428A0A0B4J2F2 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
LOC102724428A0A0B4J2F2 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LOC102724428A0A0B4J2F2 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
LOC102724428A0A0B4J2F2 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LOC102724428A0A0B4J2F2 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LOC102724428A0A0B4J2F2 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC19.31■□□□□ 0.68
LOC102724428A0A0B4J2F2 ACE-203ENST00000413513 2237 ntTSL 2 BASIC19.31■□□□□ 0.68
LOC102724428A0A0B4J2F2 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
LOC102724428A0A0B4J2F2 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
LOC102724428A0A0B4J2F2 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LOC102724428A0A0B4J2F2 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LOC102724428A0A0B4J2F2 RBM38-204ENST00000371219 760 ntTSL 2 BASIC19.31■□□□□ 0.68
LOC102724428A0A0B4J2F2 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LOC102724428A0A0B4J2F2 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LOC102724428A0A0B4J2F2 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC19.31■□□□□ 0.68
LOC102724428A0A0B4J2F2 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC19.31■□□□□ 0.68
LOC102724428A0A0B4J2F2 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LOC102724428A0A0B4J2F2 PAM16-211ENST00000575848 518 ntTSL 3 BASIC19.31■□□□□ 0.68
LOC102724428A0A0B4J2F2 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
LOC102724428A0A0B4J2F2 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC19.31■□□□□ 0.68
LOC102724428A0A0B4J2F2 AC132192.2-201ENST00000596206 1147 ntBASIC19.31■□□□□ 0.68
LOC102724428A0A0B4J2F2 COX6A1P2-201ENST00000620597 330 ntBASIC19.31■□□□□ 0.68
LOC102724428A0A0B4J2F2 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LOC102724428A0A0B4J2F2 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LOC102724428A0A0B4J2F2 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
LOC102724428A0A0B4J2F2 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LOC102724428A0A0B4J2F2 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC19.31■□□□□ 0.68
LOC102724428A0A0B4J2F2 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LOC102724428A0A0B4J2F2 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LOC102724428A0A0B4J2F2 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC19.31■□□□□ 0.68
LOC102724428A0A0B4J2F2 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC19.31■□□□□ 0.68
LOC102724428A0A0B4J2F2 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
LOC102724428A0A0B4J2F2 SUPT20HL2-201ENST00000486479 2409 ntBASIC19.31■□□□□ 0.68
LOC102724428A0A0B4J2F2 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC19.31■□□□□ 0.68
LOC102724428A0A0B4J2F2 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LOC102724428A0A0B4J2F2 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LOC102724428A0A0B4J2F2 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC19.3■□□□□ 0.68
LOC102724428A0A0B4J2F2 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LOC102724428A0A0B4J2F2 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LOC102724428A0A0B4J2F2 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LOC102724428A0A0B4J2F2 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LOC102724428A0A0B4J2F2 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LOC102724428A0A0B4J2F2 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
LOC102724428A0A0B4J2F2 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
LOC102724428A0A0B4J2F2 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
LOC102724428A0A0B4J2F2 AL603832.2-201ENST00000566195 2125 ntBASIC19.3■□□□□ 0.68
LOC102724428A0A0B4J2F2 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LOC102724428A0A0B4J2F2 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LOC102724428A0A0B4J2F2 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LOC102724428A0A0B4J2F2 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LOC102724428A0A0B4J2F2 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC19.3■□□□□ 0.68
LOC102724428A0A0B4J2F2 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC19.3■□□□□ 0.68
LOC102724428A0A0B4J2F2 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC19.3■□□□□ 0.68
LOC102724428A0A0B4J2F2 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LOC102724428A0A0B4J2F2 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC19.3■□□□□ 0.68
LOC102724428A0A0B4J2F2 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
LOC102724428A0A0B4J2F2 AC008805.1-201ENST00000590892 364 ntBASIC19.3■□□□□ 0.68
LOC102724428A0A0B4J2F2 IRF3-215ENST00000596822 823 ntTSL 3 BASIC19.3■□□□□ 0.68
LOC102724428A0A0B4J2F2 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC19.3■□□□□ 0.68
LOC102724428A0A0B4J2F2 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LOC102724428A0A0B4J2F2 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LOC102724428A0A0B4J2F2 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC19.3■□□□□ 0.68
LOC102724428A0A0B4J2F2 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
LOC102724428A0A0B4J2F2 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC19.3■□□□□ 0.68
LOC102724428A0A0B4J2F2 AL137783.1-201ENST00000623494 1896 ntBASIC19.3■□□□□ 0.68
LOC102724428A0A0B4J2F2 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LOC102724428A0A0B4J2F2 BLK-205ENST00000529894 2017 ntTSL 5 BASIC19.3■□□□□ 0.68
LOC102724428A0A0B4J2F2 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC19.3■□□□□ 0.68
LOC102724428A0A0B4J2F2 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
LOC102724428A0A0B4J2F2 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LOC102724428A0A0B4J2F2 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC19.3■□□□□ 0.68
LOC102724428A0A0B4J2F2 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
LOC102724428A0A0B4J2F2 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC19.3■□□□□ 0.68
LOC102724428A0A0B4J2F2 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LOC102724428A0A0B4J2F2 AC244394.1-201ENST00000435000 1665 ntBASIC19.3■□□□□ 0.68
LOC102724428A0A0B4J2F2 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
LOC102724428A0A0B4J2F2 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
LOC102724428A0A0B4J2F2 MBLAC2-202ENST00000514906 1936 ntBASIC19.29■□□□□ 0.68
LOC102724428A0A0B4J2F2 AMT-239ENST00000636865 1914 ntTSL 5 BASIC19.29■□□□□ 0.68
LOC102724428A0A0B4J2F2 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LOC102724428A0A0B4J2F2 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LOC102724428A0A0B4J2F2 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LOC102724428A0A0B4J2F2 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LOC102724428A0A0B4J2F2 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LOC102724428A0A0B4J2F2 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
LOC102724428A0A0B4J2F2 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC19.29■□□□□ 0.68
LOC102724428A0A0B4J2F2 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LOC102724428A0A0B4J2F2 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
LOC102724428A0A0B4J2F2 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LOC102724428A0A0B4J2F2 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LOC102724428A0A0B4J2F2 AL355334.1-201ENST00000417713 215 ntBASIC19.29■□□□□ 0.68
LOC102724428A0A0B4J2F2 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC19.29■□□□□ 0.68
LOC102724428A0A0B4J2F2 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms