Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC17.5■□□□□ 0.39
HDAC6Q9UBN7 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17.5■□□□□ 0.39
HDAC6Q9UBN7 AL583810.1-201ENST00000553344 1045 ntBASIC17.5■□□□□ 0.39
HDAC6Q9UBN7 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC17.5■□□□□ 0.39
HDAC6Q9UBN7 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC17.5■□□□□ 0.39
HDAC6Q9UBN7 CLUHP6-201ENST00000580789 941 ntBASIC17.5■□□□□ 0.39
HDAC6Q9UBN7 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC17.5■□□□□ 0.39
HDAC6Q9UBN7 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HDAC6Q9UBN7 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC17.5■□□□□ 0.39
HDAC6Q9UBN7 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
HDAC6Q9UBN7 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC17.5■□□□□ 0.39
HDAC6Q9UBN7 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC17.5■□□□□ 0.39
HDAC6Q9UBN7 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HDAC6Q9UBN7 TP73-213ENST00000604479 1623 ntTSL 5 BASIC17.5■□□□□ 0.39
HDAC6Q9UBN7 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
HDAC6Q9UBN7 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
HDAC6Q9UBN7 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
HDAC6Q9UBN7 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.5■□□□□ 0.39
HDAC6Q9UBN7 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.5■□□□□ 0.39
HDAC6Q9UBN7 PGR-210ENST00000619228 3038 ntTSL 5 BASIC17.5■□□□□ 0.39
HDAC6Q9UBN7 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.5■□□□□ 0.39
HDAC6Q9UBN7 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HDAC6Q9UBN7 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HDAC6Q9UBN7 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HDAC6Q9UBN7 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC17.49■□□□□ 0.39
HDAC6Q9UBN7 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HDAC6Q9UBN7 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HDAC6Q9UBN7 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HDAC6Q9UBN7 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
HDAC6Q9UBN7 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC17.49■□□□□ 0.39
HDAC6Q9UBN7 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.49■□□□□ 0.39
HDAC6Q9UBN7 SSR4P1-203ENST00000599569 2260 ntBASIC17.49■□□□□ 0.39
HDAC6Q9UBN7 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC17.49■□□□□ 0.39
HDAC6Q9UBN7 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HDAC6Q9UBN7 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
HDAC6Q9UBN7 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC17.49■□□□□ 0.39
HDAC6Q9UBN7 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC17.49■□□□□ 0.39
HDAC6Q9UBN7 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HDAC6Q9UBN7 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC17.49■□□□□ 0.39
HDAC6Q9UBN7 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
HDAC6Q9UBN7 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC17.49■□□□□ 0.39
HDAC6Q9UBN7 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC17.49■□□□□ 0.39
HDAC6Q9UBN7 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
HDAC6Q9UBN7 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HDAC6Q9UBN7 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HDAC6Q9UBN7 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
HDAC6Q9UBN7 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC17.49■□□□□ 0.39
HDAC6Q9UBN7 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC17.49■□□□□ 0.39
HDAC6Q9UBN7 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.49■□□□□ 0.39
HDAC6Q9UBN7 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC17.49■□□□□ 0.39
HDAC6Q9UBN7 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC17.49■□□□□ 0.39
HDAC6Q9UBN7 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
HDAC6Q9UBN7 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
HDAC6Q9UBN7 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.49■□□□□ 0.39
HDAC6Q9UBN7 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HDAC6Q9UBN7 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC17.49■□□□□ 0.39
HDAC6Q9UBN7 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HDAC6Q9UBN7 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HDAC6Q9UBN7 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HDAC6Q9UBN7 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.49■□□□□ 0.39
HDAC6Q9UBN7 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HDAC6Q9UBN7 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC17.48■□□□□ 0.39
HDAC6Q9UBN7 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HDAC6Q9UBN7 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HDAC6Q9UBN7 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
HDAC6Q9UBN7 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
HDAC6Q9UBN7 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HDAC6Q9UBN7 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.48■□□□□ 0.39
HDAC6Q9UBN7 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC17.48■□□□□ 0.39
HDAC6Q9UBN7 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HDAC6Q9UBN7 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
HDAC6Q9UBN7 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC17.48■□□□□ 0.39
HDAC6Q9UBN7 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.48■□□□□ 0.39
HDAC6Q9UBN7 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HDAC6Q9UBN7 MSTO2P-201ENST00000314835 1709 ntBASIC17.48■□□□□ 0.39
HDAC6Q9UBN7 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
HDAC6Q9UBN7 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HDAC6Q9UBN7 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
HDAC6Q9UBN7 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HDAC6Q9UBN7 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HDAC6Q9UBN7 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HDAC6Q9UBN7 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC17.48■□□□□ 0.39
HDAC6Q9UBN7 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
HDAC6Q9UBN7 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC17.48■□□□□ 0.39
HDAC6Q9UBN7 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HDAC6Q9UBN7 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
HDAC6Q9UBN7 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HDAC6Q9UBN7 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC17.48■□□□□ 0.39
HDAC6Q9UBN7 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC17.48■□□□□ 0.39
HDAC6Q9UBN7 MIR4525-201ENST00000580000 75 ntBASIC17.48■□□□□ 0.39
HDAC6Q9UBN7 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.48■□□□□ 0.39
HDAC6Q9UBN7 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC17.48■□□□□ 0.39
HDAC6Q9UBN7 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC17.48■□□□□ 0.39
HDAC6Q9UBN7 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HDAC6Q9UBN7 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
HDAC6Q9UBN7 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HDAC6Q9UBN7 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC17.48■□□□□ 0.39
HDAC6Q9UBN7 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC17.48■□□□□ 0.39
HDAC6Q9UBN7 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HDAC6Q9UBN7 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms