Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMG20BQ9P0W2 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC18.75■□□□□ 0.59
HMG20BQ9P0W2 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
HMG20BQ9P0W2 AL355864.2-201ENST00000447420 863 ntBASIC18.75■□□□□ 0.59
HMG20BQ9P0W2 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC18.75■□□□□ 0.59
HMG20BQ9P0W2 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC18.75■□□□□ 0.59
HMG20BQ9P0W2 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC18.75■□□□□ 0.59
HMG20BQ9P0W2 FTH1P14-201ENST00000482930 551 ntBASIC18.75■□□□□ 0.59
HMG20BQ9P0W2 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC18.75■□□□□ 0.59
HMG20BQ9P0W2 NAA38-206ENST00000576384 424 ntTSL 2 BASIC18.75■□□□□ 0.59
HMG20BQ9P0W2 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC18.75■□□□□ 0.59
HMG20BQ9P0W2 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMG20BQ9P0W2 RPS24-214ENST00000613865 538 ntTSL 5 BASIC18.75■□□□□ 0.59
HMG20BQ9P0W2 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC18.75■□□□□ 0.59
HMG20BQ9P0W2 AP005019.2-201ENST00000615104 511 ntBASIC18.75■□□□□ 0.59
HMG20BQ9P0W2 BX539320.1-201ENST00000623759 877 ntBASIC18.75■□□□□ 0.59
HMG20BQ9P0W2 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HMG20BQ9P0W2 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC18.75■□□□□ 0.59
HMG20BQ9P0W2 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
HMG20BQ9P0W2 COX11-210ENST00000639671 696 ntBASIC18.75■□□□□ 0.59
HMG20BQ9P0W2 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC18.75■□□□□ 0.59
HMG20BQ9P0W2 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
HMG20BQ9P0W2 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMG20BQ9P0W2 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
HMG20BQ9P0W2 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC18.75■□□□□ 0.59
HMG20BQ9P0W2 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
HMG20BQ9P0W2 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMG20BQ9P0W2 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HMG20BQ9P0W2 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMG20BQ9P0W2 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMG20BQ9P0W2 AC023157.3-201ENST00000619086 2088 ntBASIC18.75■□□□□ 0.59
HMG20BQ9P0W2 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
HMG20BQ9P0W2 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMG20BQ9P0W2 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC18.75■□□□□ 0.59
HMG20BQ9P0W2 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HMG20BQ9P0W2 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMG20BQ9P0W2 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMG20BQ9P0W2 AC093525.8-201ENST00000624099 1342 ntBASIC18.74■□□□□ 0.59
HMG20BQ9P0W2 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
HMG20BQ9P0W2 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC18.74■□□□□ 0.59
HMG20BQ9P0W2 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC18.74■□□□□ 0.59
HMG20BQ9P0W2 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC18.74■□□□□ 0.59
HMG20BQ9P0W2 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMG20BQ9P0W2 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMG20BQ9P0W2 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HMG20BQ9P0W2 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMG20BQ9P0W2 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC18.74■□□□□ 0.59
HMG20BQ9P0W2 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMG20BQ9P0W2 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC18.74■□□□□ 0.59
HMG20BQ9P0W2 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC18.74■□□□□ 0.59
HMG20BQ9P0W2 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HMG20BQ9P0W2 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC18.74■□□□□ 0.59
HMG20BQ9P0W2 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC18.74■□□□□ 0.59
HMG20BQ9P0W2 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC18.74■□□□□ 0.59
HMG20BQ9P0W2 USB1-202ENST00000423271 1217 ntTSL 2 BASIC18.74■□□□□ 0.59
HMG20BQ9P0W2 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HMG20BQ9P0W2 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC18.74■□□□□ 0.59
HMG20BQ9P0W2 CTBP2P5-201ENST00000454986 1264 ntBASIC18.74■□□□□ 0.59
HMG20BQ9P0W2 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC18.74■□□□□ 0.59
HMG20BQ9P0W2 AC104989.1-201ENST00000519711 778 ntBASIC18.74■□□□□ 0.59
HMG20BQ9P0W2 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC18.74■□□□□ 0.59
HMG20BQ9P0W2 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC18.74■□□□□ 0.59
HMG20BQ9P0W2 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC18.74■□□□□ 0.59
HMG20BQ9P0W2 AC244669.2-201ENST00000612320 853 ntBASIC18.74■□□□□ 0.59
HMG20BQ9P0W2 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HMG20BQ9P0W2 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMG20BQ9P0W2 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMG20BQ9P0W2 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC18.74■□□□□ 0.59
HMG20BQ9P0W2 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC18.74■□□□□ 0.59
HMG20BQ9P0W2 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMG20BQ9P0W2 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC18.74■□□□□ 0.59
HMG20BQ9P0W2 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HMG20BQ9P0W2 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMG20BQ9P0W2 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMG20BQ9P0W2 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMG20BQ9P0W2 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMG20BQ9P0W2 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HMG20BQ9P0W2 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HMG20BQ9P0W2 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HMG20BQ9P0W2 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
HMG20BQ9P0W2 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
HMG20BQ9P0W2 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HMG20BQ9P0W2 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC18.73■□□□□ 0.59
HMG20BQ9P0W2 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC18.73■□□□□ 0.59
HMG20BQ9P0W2 AC138035.3-201ENST00000622706 2791 ntBASIC18.73■□□□□ 0.59
HMG20BQ9P0W2 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HMG20BQ9P0W2 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HMG20BQ9P0W2 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HMG20BQ9P0W2 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
HMG20BQ9P0W2 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
HMG20BQ9P0W2 PGGT1BP2-201ENST00000398621 1028 ntBASIC18.73■□□□□ 0.59
HMG20BQ9P0W2 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC18.73■□□□□ 0.59
HMG20BQ9P0W2 AC007551.1-201ENST00000457394 519 ntBASIC18.73■□□□□ 0.59
HMG20BQ9P0W2 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
HMG20BQ9P0W2 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HMG20BQ9P0W2 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC18.73■□□□□ 0.59
HMG20BQ9P0W2 APRT-204ENST00000563655 709 ntTSL 5 BASIC18.73■□□□□ 0.59
HMG20BQ9P0W2 AP005482.1-201ENST00000563722 1273 ntBASIC18.73■□□□□ 0.59
HMG20BQ9P0W2 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC18.73■□□□□ 0.59
HMG20BQ9P0W2 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms