Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CHD8Q9HCK8 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC14□□□□□ -0.17
CHD8Q9HCK8 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14□□□□□ -0.17
CHD8Q9HCK8 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14□□□□□ -0.17
CHD8Q9HCK8 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
CHD8Q9HCK8 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CHD8Q9HCK8 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14□□□□□ -0.17
CHD8Q9HCK8 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
CHD8Q9HCK8 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CHD8Q9HCK8 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
CHD8Q9HCK8 TSGA13-201ENST00000356588 1372 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CHD8Q9HCK8 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CHD8Q9HCK8 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
CHD8Q9HCK8 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
CHD8Q9HCK8 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC13.99□□□□□ -0.17
CHD8Q9HCK8 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC13.99□□□□□ -0.17
CHD8Q9HCK8 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CHD8Q9HCK8 RN7SKP109-201ENST00000410592 316 ntBASIC13.99□□□□□ -0.17
CHD8Q9HCK8 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC13.99□□□□□ -0.17
CHD8Q9HCK8 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CHD8Q9HCK8 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC13.99□□□□□ -0.17
CHD8Q9HCK8 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
CHD8Q9HCK8 CBR3-AS1-206ENST00000608632 659 ntTSL 5 BASIC13.99□□□□□ -0.17
CHD8Q9HCK8 AL603764.1-201ENST00000636452 321 ntBASIC13.99□□□□□ -0.17
CHD8Q9HCK8 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CHD8Q9HCK8 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
CHD8Q9HCK8 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
CHD8Q9HCK8 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CHD8Q9HCK8 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
CHD8Q9HCK8 MST1L-201ENST00000442552 2185 ntBASIC13.99□□□□□ -0.17
CHD8Q9HCK8 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CHD8Q9HCK8 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CHD8Q9HCK8 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.99□□□□□ -0.17
CHD8Q9HCK8 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CHD8Q9HCK8 ACTG1P19-201ENST00000418987 1116 ntBASIC13.99□□□□□ -0.17
CHD8Q9HCK8 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC13.99□□□□□ -0.17
CHD8Q9HCK8 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.99□□□□□ -0.17
CHD8Q9HCK8 SNRPF-205ENST00000553192 552 ntTSL 4 BASIC13.99□□□□□ -0.17
CHD8Q9HCK8 AC006483.2-201ENST00000609813 515 ntBASIC13.99□□□□□ -0.17
CHD8Q9HCK8 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC13.99□□□□□ -0.17
CHD8Q9HCK8 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CHD8Q9HCK8 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CHD8Q9HCK8 AC020910.5-201ENST00000623668 1865 ntBASIC13.99□□□□□ -0.17
CHD8Q9HCK8 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.99□□□□□ -0.17
CHD8Q9HCK8 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CHD8Q9HCK8 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CHD8Q9HCK8 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CHD8Q9HCK8 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CHD8Q9HCK8 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.99□□□□□ -0.17
CHD8Q9HCK8 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC13.99□□□□□ -0.17
CHD8Q9HCK8 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC13.98□□□□□ -0.17
CHD8Q9HCK8 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CHD8Q9HCK8 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CHD8Q9HCK8 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC13.98□□□□□ -0.17
CHD8Q9HCK8 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC13.98□□□□□ -0.17
CHD8Q9HCK8 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CHD8Q9HCK8 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CHD8Q9HCK8 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CHD8Q9HCK8 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC13.98□□□□□ -0.17
CHD8Q9HCK8 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC13.98□□□□□ -0.17
CHD8Q9HCK8 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC13.98□□□□□ -0.17
CHD8Q9HCK8 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC13.98□□□□□ -0.17
CHD8Q9HCK8 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC13.98□□□□□ -0.17
CHD8Q9HCK8 DIO3OS-211ENST00000557532 712 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CHD8Q9HCK8 GOLGA2P7-209ENST00000560408 745 ntBASIC13.98□□□□□ -0.17
CHD8Q9HCK8 AP006248.1-201ENST00000610471 67 ntBASIC13.98□□□□□ -0.17
CHD8Q9HCK8 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC13.98□□□□□ -0.17
CHD8Q9HCK8 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CHD8Q9HCK8 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CHD8Q9HCK8 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CHD8Q9HCK8 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CHD8Q9HCK8 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CHD8Q9HCK8 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CHD8Q9HCK8 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CHD8Q9HCK8 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CHD8Q9HCK8 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.98□□□□□ -0.17
CHD8Q9HCK8 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CHD8Q9HCK8 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC13.98□□□□□ -0.17
CHD8Q9HCK8 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CHD8Q9HCK8 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CHD8Q9HCK8 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CHD8Q9HCK8 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CHD8Q9HCK8 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
CHD8Q9HCK8 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CHD8Q9HCK8 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CHD8Q9HCK8 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CHD8Q9HCK8 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC13.98□□□□□ -0.17
CHD8Q9HCK8 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CHD8Q9HCK8 AL512306.1-201ENST00000432698 848 ntBASIC13.98□□□□□ -0.17
CHD8Q9HCK8 AC131235.2-201ENST00000445553 1057 ntBASIC13.98□□□□□ -0.17
CHD8Q9HCK8 AC021321.1-201ENST00000607397 1113 ntBASIC13.98□□□□□ -0.17
CHD8Q9HCK8 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC13.98□□□□□ -0.17
CHD8Q9HCK8 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC13.98□□□□□ -0.17
CHD8Q9HCK8 REXO1L5P-201ENST00000622260 2098 ntBASIC13.98□□□□□ -0.17
CHD8Q9HCK8 HLF-202ENST00000430986 1385 ntTSL 2 BASIC13.98□□□□□ -0.17
CHD8Q9HCK8 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC13.98□□□□□ -0.17
CHD8Q9HCK8 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CHD8Q9HCK8 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CHD8Q9HCK8 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CHD8Q9HCK8 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 1365.4 ms