Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
COMMD4Q9H0A8 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
COMMD4Q9H0A8 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.73□□□□□ -0.21
COMMD4Q9H0A8 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
COMMD4Q9H0A8 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
COMMD4Q9H0A8 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
COMMD4Q9H0A8 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.73□□□□□ -0.21
COMMD4Q9H0A8 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
COMMD4Q9H0A8 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
COMMD4Q9H0A8 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
COMMD4Q9H0A8 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
COMMD4Q9H0A8 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.72□□□□□ -0.21
COMMD4Q9H0A8 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
COMMD4Q9H0A8 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
COMMD4Q9H0A8 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
COMMD4Q9H0A8 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
COMMD4Q9H0A8 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
COMMD4Q9H0A8 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
COMMD4Q9H0A8 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
COMMD4Q9H0A8 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
COMMD4Q9H0A8 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
COMMD4Q9H0A8 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
COMMD4Q9H0A8 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
COMMD4Q9H0A8 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
COMMD4Q9H0A8 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.72□□□□□ -0.21
COMMD4Q9H0A8 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
COMMD4Q9H0A8 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.72□□□□□ -0.21
COMMD4Q9H0A8 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
COMMD4Q9H0A8 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
COMMD4Q9H0A8 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.72□□□□□ -0.21
COMMD4Q9H0A8 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.72□□□□□ -0.21
COMMD4Q9H0A8 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
COMMD4Q9H0A8 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
COMMD4Q9H0A8 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
COMMD4Q9H0A8 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
COMMD4Q9H0A8 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC13.72□□□□□ -0.21
COMMD4Q9H0A8 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC13.72□□□□□ -0.21
COMMD4Q9H0A8 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC13.72□□□□□ -0.21
COMMD4Q9H0A8 KRT8P23-201ENST00000560090 1207 ntBASIC13.72□□□□□ -0.21
COMMD4Q9H0A8 IGHV3OR16-6-201ENST00000568775 360 ntBASIC13.72□□□□□ -0.21
COMMD4Q9H0A8 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
COMMD4Q9H0A8 CAND2-206ENST00000626378 333 ntTSL 5 BASIC13.72□□□□□ -0.21
COMMD4Q9H0A8 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC13.72□□□□□ -0.21
COMMD4Q9H0A8 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
COMMD4Q9H0A8 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.72□□□□□ -0.21
COMMD4Q9H0A8 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.72□□□□□ -0.21
COMMD4Q9H0A8 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
COMMD4Q9H0A8 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
COMMD4Q9H0A8 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
COMMD4Q9H0A8 GRK6P1-201ENST00000400595 1711 ntBASIC13.72□□□□□ -0.21
COMMD4Q9H0A8 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
COMMD4Q9H0A8 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
COMMD4Q9H0A8 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.72□□□□□ -0.21
COMMD4Q9H0A8 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.72□□□□□ -0.21
COMMD4Q9H0A8 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
COMMD4Q9H0A8 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.72□□□□□ -0.21
COMMD4Q9H0A8 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
COMMD4Q9H0A8 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.72□□□□□ -0.21
COMMD4Q9H0A8 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
COMMD4Q9H0A8 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
COMMD4Q9H0A8 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
COMMD4Q9H0A8 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
COMMD4Q9H0A8 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
COMMD4Q9H0A8 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
COMMD4Q9H0A8 AC084364.1-201ENST00000551967 1556 ntBASIC13.71□□□□□ -0.21
COMMD4Q9H0A8 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
COMMD4Q9H0A8 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
COMMD4Q9H0A8 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
COMMD4Q9H0A8 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
COMMD4Q9H0A8 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
COMMD4Q9H0A8 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
COMMD4Q9H0A8 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
COMMD4Q9H0A8 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
COMMD4Q9H0A8 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
COMMD4Q9H0A8 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
COMMD4Q9H0A8 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.71□□□□□ -0.21
COMMD4Q9H0A8 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
COMMD4Q9H0A8 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.71□□□□□ -0.21
COMMD4Q9H0A8 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
COMMD4Q9H0A8 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
COMMD4Q9H0A8 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13.71□□□□□ -0.21
COMMD4Q9H0A8 MED15P5-201ENST00000423150 992 ntBASIC13.71□□□□□ -0.21
COMMD4Q9H0A8 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC13.71□□□□□ -0.21
COMMD4Q9H0A8 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC13.71□□□□□ -0.21
COMMD4Q9H0A8 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
COMMD4Q9H0A8 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC13.71□□□□□ -0.21
COMMD4Q9H0A8 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC13.71□□□□□ -0.21
COMMD4Q9H0A8 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
COMMD4Q9H0A8 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC13.71□□□□□ -0.21
COMMD4Q9H0A8 SLC25A1P1-201ENST00000528351 927 ntBASIC13.71□□□□□ -0.21
COMMD4Q9H0A8 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
COMMD4Q9H0A8 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC13.71□□□□□ -0.21
COMMD4Q9H0A8 INO80E-210ENST00000567705 880 ntTSL 3 BASIC13.71□□□□□ -0.21
COMMD4Q9H0A8 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.71□□□□□ -0.21
COMMD4Q9H0A8 PIN1-206ENST00000587625 878 ntTSL 2 BASIC13.71□□□□□ -0.21
COMMD4Q9H0A8 AL121894.2-201ENST00000602977 491 ntBASIC13.71□□□□□ -0.21
COMMD4Q9H0A8 AC120114.3-201ENST00000611923 658 ntBASIC13.71□□□□□ -0.21
COMMD4Q9H0A8 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC13.71□□□□□ -0.21
COMMD4Q9H0A8 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
COMMD4Q9H0A8 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms