Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 MPI-203ENST00000535694 1523 ntTSL 2 BASIC4.21□□□□□ -1.74
LCE3DQ9BYE3 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LCE3DQ9BYE3 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LCE3DQ9BYE3 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
LCE3DQ9BYE3 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC4.21□□□□□ -1.74
LCE3DQ9BYE3 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 PTPRN2-203ENST00000389418 4706 ntAPPRIS P4 TSL 1 (best) BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 AC027601.5-201ENST00000624065 2482 ntBASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 AC136759.1-202ENST00000530858 2194 ntBASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 PAX7-203ENST00000420770 5538 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 RPL23A-204ENST00000422514 1562 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 FANCA-202ENST00000389301 5451 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 TNRC6C-211ENST00000636222 7093 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 WASH3P-207ENST00000560956 1394 ntBASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 FO538757.1-201ENST00000623083 1397 ntBASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 CD99-202ENST00000381180 530 ntTSL 2 BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 KRTAP4-4-201ENST00000390661 1081 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 RCN1P2-201ENST00000398357 915 ntBASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 POM121L3P-201ENST00000419331 1163 ntBASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 AL117339.1-201ENST00000419779 428 ntTSL 2 BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 FAM9B-203ENST00000428477 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 THAP5-204ENST00000438865 868 ntTSL 2 BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC4.2□□□□□ -1.74
LCE3DQ9BYE3 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms