Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
S1PR3Q99500 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
S1PR3Q99500 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
S1PR3Q99500 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
S1PR3Q99500 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC12.82□□□□□ -0.36
S1PR3Q99500 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
S1PR3Q99500 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC12.82□□□□□ -0.36
S1PR3Q99500 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
S1PR3Q99500 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC12.82□□□□□ -0.36
S1PR3Q99500 PPP6R2P1-201ENST00000450880 1275 ntBASIC12.82□□□□□ -0.36
S1PR3Q99500 KLF2P3-201ENST00000451977 1087 ntBASIC12.82□□□□□ -0.36
S1PR3Q99500 AC125807.1-201ENST00000483097 614 ntBASIC12.82□□□□□ -0.36
S1PR3Q99500 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC12.82□□□□□ -0.36
S1PR3Q99500 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC12.82□□□□□ -0.36
S1PR3Q99500 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
S1PR3Q99500 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC12.82□□□□□ -0.36
S1PR3Q99500 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC12.82□□□□□ -0.36
S1PR3Q99500 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC12.82□□□□□ -0.36
S1PR3Q99500 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC12.82□□□□□ -0.36
S1PR3Q99500 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
S1PR3Q99500 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
S1PR3Q99500 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
S1PR3Q99500 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
S1PR3Q99500 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
S1PR3Q99500 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
S1PR3Q99500 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
S1PR3Q99500 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
S1PR3Q99500 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
S1PR3Q99500 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
S1PR3Q99500 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC12.82□□□□□ -0.36
S1PR3Q99500 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
S1PR3Q99500 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
S1PR3Q99500 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
S1PR3Q99500 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
S1PR3Q99500 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
S1PR3Q99500 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
S1PR3Q99500 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
S1PR3Q99500 POR-201ENST00000394893 2532 ntTSL 5 BASIC12.82□□□□□ -0.36
S1PR3Q99500 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
S1PR3Q99500 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
S1PR3Q99500 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
S1PR3Q99500 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
S1PR3Q99500 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
S1PR3Q99500 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
S1PR3Q99500 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
S1PR3Q99500 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC12.81□□□□□ -0.36
S1PR3Q99500 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
S1PR3Q99500 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
S1PR3Q99500 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
S1PR3Q99500 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
S1PR3Q99500 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
S1PR3Q99500 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
S1PR3Q99500 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC12.81□□□□□ -0.36
S1PR3Q99500 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC12.81□□□□□ -0.36
S1PR3Q99500 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
S1PR3Q99500 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
S1PR3Q99500 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
S1PR3Q99500 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
S1PR3Q99500 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
S1PR3Q99500 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC12.81□□□□□ -0.36
S1PR3Q99500 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC12.81□□□□□ -0.36
S1PR3Q99500 NME4-207ENST00000450036 985 ntTSL 3 BASIC12.81□□□□□ -0.36
S1PR3Q99500 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC12.81□□□□□ -0.36
S1PR3Q99500 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC12.81□□□□□ -0.36
S1PR3Q99500 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC12.81□□□□□ -0.36
S1PR3Q99500 CMC2-214ENST00000565925 640 ntTSL 5 BASIC12.81□□□□□ -0.36
S1PR3Q99500 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
S1PR3Q99500 COQ4-205ENST00000609948 956 ntTSL 2 BASIC12.81□□□□□ -0.36
S1PR3Q99500 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
S1PR3Q99500 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC12.81□□□□□ -0.36
S1PR3Q99500 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
S1PR3Q99500 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
S1PR3Q99500 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
S1PR3Q99500 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
S1PR3Q99500 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
S1PR3Q99500 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC12.81□□□□□ -0.36
S1PR3Q99500 CELP-203ENST00000624767 2414 ntTSL 5 BASIC12.81□□□□□ -0.36
S1PR3Q99500 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
S1PR3Q99500 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
S1PR3Q99500 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
S1PR3Q99500 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
S1PR3Q99500 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
S1PR3Q99500 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
S1PR3Q99500 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
S1PR3Q99500 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
S1PR3Q99500 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
S1PR3Q99500 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
S1PR3Q99500 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC12.81□□□□□ -0.36
S1PR3Q99500 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC12.81□□□□□ -0.36
S1PR3Q99500 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC12.81□□□□□ -0.36
S1PR3Q99500 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
S1PR3Q99500 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
S1PR3Q99500 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
S1PR3Q99500 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC12.8□□□□□ -0.36
S1PR3Q99500 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
S1PR3Q99500 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC12.8□□□□□ -0.36
S1PR3Q99500 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
S1PR3Q99500 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
S1PR3Q99500 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
S1PR3Q99500 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms