Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDK5RAP2Q96SN8 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC17.79■□□□□ 0.44
CDK5RAP2Q96SN8 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDK5RAP2Q96SN8 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDK5RAP2Q96SN8 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDK5RAP2Q96SN8 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDK5RAP2Q96SN8 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC17.79■□□□□ 0.44
CDK5RAP2Q96SN8 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CDK5RAP2Q96SN8 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC17.79■□□□□ 0.44
CDK5RAP2Q96SN8 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC17.79■□□□□ 0.44
CDK5RAP2Q96SN8 NKG7-204ENST00000595217 816 ntTSL 2 BASIC17.79■□□□□ 0.44
CDK5RAP2Q96SN8 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.79■□□□□ 0.44
CDK5RAP2Q96SN8 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDK5RAP2Q96SN8 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDK5RAP2Q96SN8 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDK5RAP2Q96SN8 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
CDK5RAP2Q96SN8 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDK5RAP2Q96SN8 AC138035.3-201ENST00000622706 2791 ntBASIC17.79■□□□□ 0.44
CDK5RAP2Q96SN8 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CDK5RAP2Q96SN8 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDK5RAP2Q96SN8 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDK5RAP2Q96SN8 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CDK5RAP2Q96SN8 AC006058.4-201ENST00000624016 1670 ntBASIC17.79■□□□□ 0.44
CDK5RAP2Q96SN8 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDK5RAP2Q96SN8 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDK5RAP2Q96SN8 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.78■□□□□ 0.44
CDK5RAP2Q96SN8 PGR-210ENST00000619228 3038 ntTSL 5 BASIC17.78■□□□□ 0.44
CDK5RAP2Q96SN8 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CDK5RAP2Q96SN8 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDK5RAP2Q96SN8 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDK5RAP2Q96SN8 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDK5RAP2Q96SN8 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.78■□□□□ 0.44
CDK5RAP2Q96SN8 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CDK5RAP2Q96SN8 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC17.78■□□□□ 0.44
CDK5RAP2Q96SN8 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDK5RAP2Q96SN8 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC17.78■□□□□ 0.44
CDK5RAP2Q96SN8 AC026434.2-201ENST00000506094 1078 ntBASIC17.78■□□□□ 0.44
CDK5RAP2Q96SN8 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC17.78■□□□□ 0.44
CDK5RAP2Q96SN8 CSH2-206ENST00000560142 749 ntTSL 5 BASIC17.78■□□□□ 0.44
CDK5RAP2Q96SN8 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDK5RAP2Q96SN8 AC007663.3-201ENST00000609632 465 ntBASIC17.78■□□□□ 0.44
CDK5RAP2Q96SN8 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CDK5RAP2Q96SN8 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDK5RAP2Q96SN8 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDK5RAP2Q96SN8 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDK5RAP2Q96SN8 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDK5RAP2Q96SN8 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDK5RAP2Q96SN8 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDK5RAP2Q96SN8 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDK5RAP2Q96SN8 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC17.78■□□□□ 0.44
CDK5RAP2Q96SN8 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC17.78■□□□□ 0.44
CDK5RAP2Q96SN8 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDK5RAP2Q96SN8 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDK5RAP2Q96SN8 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC17.78■□□□□ 0.44
CDK5RAP2Q96SN8 ADM-202ENST00000524948 584 ntTSL 2 BASIC17.78■□□□□ 0.44
CDK5RAP2Q96SN8 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDK5RAP2Q96SN8 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDK5RAP2Q96SN8 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC17.78■□□□□ 0.44
CDK5RAP2Q96SN8 AC020914.3-201ENST00000594712 304 ntBASIC17.78■□□□□ 0.44
CDK5RAP2Q96SN8 AC091544.8-201ENST00000619490 361 ntBASIC17.78■□□□□ 0.44
CDK5RAP2Q96SN8 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDK5RAP2Q96SN8 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CDK5RAP2Q96SN8 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC17.77■□□□□ 0.44
CDK5RAP2Q96SN8 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
CDK5RAP2Q96SN8 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CDK5RAP2Q96SN8 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CDK5RAP2Q96SN8 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.77■□□□□ 0.44
CDK5RAP2Q96SN8 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDK5RAP2Q96SN8 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC17.77■□□□□ 0.44
CDK5RAP2Q96SN8 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDK5RAP2Q96SN8 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CDK5RAP2Q96SN8 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDK5RAP2Q96SN8 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CDK5RAP2Q96SN8 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC17.77■□□□□ 0.44
CDK5RAP2Q96SN8 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDK5RAP2Q96SN8 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDK5RAP2Q96SN8 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC17.77■□□□□ 0.44
CDK5RAP2Q96SN8 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.77■□□□□ 0.44
CDK5RAP2Q96SN8 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDK5RAP2Q96SN8 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CDK5RAP2Q96SN8 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDK5RAP2Q96SN8 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CDK5RAP2Q96SN8 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC17.77■□□□□ 0.43
CDK5RAP2Q96SN8 GCOM2-201ENST00000509133 1104 ntBASIC17.77■□□□□ 0.43
CDK5RAP2Q96SN8 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC17.77■□□□□ 0.43
CDK5RAP2Q96SN8 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
CDK5RAP2Q96SN8 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC17.77■□□□□ 0.43
CDK5RAP2Q96SN8 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CDK5RAP2Q96SN8 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC17.77■□□□□ 0.43
CDK5RAP2Q96SN8 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC17.77■□□□□ 0.43
CDK5RAP2Q96SN8 AP001505.2-201ENST00000616815 443 ntBASIC17.77■□□□□ 0.43
CDK5RAP2Q96SN8 PPA1-206ENST00000625364 644 ntTSL 5 BASIC17.77■□□□□ 0.43
CDK5RAP2Q96SN8 AL162727.3-201ENST00000635661 2787 ntBASIC17.77■□□□□ 0.43
CDK5RAP2Q96SN8 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CDK5RAP2Q96SN8 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
CDK5RAP2Q96SN8 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.43
CDK5RAP2Q96SN8 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
CDK5RAP2Q96SN8 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CDK5RAP2Q96SN8 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CDK5RAP2Q96SN8 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 652.2 ms