Protein–RNA interactions for Protein: Q96IS3

RAX2, Retina and anterior neural fold homeobox protein 2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAX2Q96IS3 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAX2Q96IS3 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC12.13□□□□□ -0.47
RAX2Q96IS3 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC12.13□□□□□ -0.47
RAX2Q96IS3 AL607033.1-201ENST00000623900 1599 ntBASIC12.13□□□□□ -0.47
RAX2Q96IS3 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAX2Q96IS3 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAX2Q96IS3 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC12.13□□□□□ -0.47
RAX2Q96IS3 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAX2Q96IS3 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAX2Q96IS3 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC12.13□□□□□ -0.47
RAX2Q96IS3 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC12.13□□□□□ -0.47
RAX2Q96IS3 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAX2Q96IS3 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAX2Q96IS3 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAX2Q96IS3 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAX2Q96IS3 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC12.13□□□□□ -0.47
RAX2Q96IS3 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC12.13□□□□□ -0.47
RAX2Q96IS3 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RAX2Q96IS3 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC12.13□□□□□ -0.47
RAX2Q96IS3 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RAX2Q96IS3 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC12.13□□□□□ -0.47
RAX2Q96IS3 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAX2Q96IS3 LRRFIP1P1-201ENST00000498774 2246 ntBASIC12.13□□□□□ -0.47
RAX2Q96IS3 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
RAX2Q96IS3 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC12.13□□□□□ -0.47
RAX2Q96IS3 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC12.13□□□□□ -0.47
RAX2Q96IS3 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC12.13□□□□□ -0.47
RAX2Q96IS3 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAX2Q96IS3 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RAX2Q96IS3 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RAX2Q96IS3 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
RAX2Q96IS3 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
RAX2Q96IS3 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAX2Q96IS3 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RAX2Q96IS3 PGF-202ENST00000405431 666 ntTSL 5 BASIC12.13□□□□□ -0.47
RAX2Q96IS3 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC12.13□□□□□ -0.47
RAX2Q96IS3 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC12.13□□□□□ -0.47
RAX2Q96IS3 TOMM22P5-201ENST00000416399 439 ntBASIC12.13□□□□□ -0.47
RAX2Q96IS3 GPR53P-205ENST00000457298 1084 ntBASIC12.13□□□□□ -0.47
RAX2Q96IS3 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC12.13□□□□□ -0.47
RAX2Q96IS3 GLI4-203ENST00000517468 963 ntTSL 5 BASIC12.13□□□□□ -0.47
RAX2Q96IS3 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC12.13□□□□□ -0.47
RAX2Q96IS3 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC12.13□□□□□ -0.47
RAX2Q96IS3 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC12.13□□□□□ -0.47
RAX2Q96IS3 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC12.13□□□□□ -0.47
RAX2Q96IS3 AC097359.3-201ENST00000603982 1210 ntBASIC12.13□□□□□ -0.47
RAX2Q96IS3 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC12.13□□□□□ -0.47
RAX2Q96IS3 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC12.13□□□□□ -0.47
RAX2Q96IS3 AL033527.5-201ENST00000641382 801 ntBASIC12.13□□□□□ -0.47
RAX2Q96IS3 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAX2Q96IS3 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAX2Q96IS3 AC006449.5-201ENST00000610658 2098 ntBASIC12.13□□□□□ -0.47
RAX2Q96IS3 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAX2Q96IS3 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC12.13□□□□□ -0.47
RAX2Q96IS3 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
RAX2Q96IS3 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAX2Q96IS3 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAX2Q96IS3 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC12.13□□□□□ -0.47
RAX2Q96IS3 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAX2Q96IS3 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAX2Q96IS3 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC12.13□□□□□ -0.47
RAX2Q96IS3 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAX2Q96IS3 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC12.13□□□□□ -0.47
RAX2Q96IS3 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
RAX2Q96IS3 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAX2Q96IS3 MTHFR-217ENST00000641820 1569 ntBASIC12.13□□□□□ -0.47
RAX2Q96IS3 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAX2Q96IS3 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAX2Q96IS3 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC12.13□□□□□ -0.47
RAX2Q96IS3 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC12.13□□□□□ -0.47
RAX2Q96IS3 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAX2Q96IS3 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
RAX2Q96IS3 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAX2Q96IS3 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAX2Q96IS3 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC12.12□□□□□ -0.47
RAX2Q96IS3 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RAX2Q96IS3 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAX2Q96IS3 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC12.12□□□□□ -0.47
RAX2Q96IS3 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
RAX2Q96IS3 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAX2Q96IS3 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAX2Q96IS3 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC12.12□□□□□ -0.47
RAX2Q96IS3 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC12.12□□□□□ -0.47
RAX2Q96IS3 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAX2Q96IS3 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RAX2Q96IS3 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC12.12□□□□□ -0.47
RAX2Q96IS3 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC12.12□□□□□ -0.47
RAX2Q96IS3 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAX2Q96IS3 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC12.12□□□□□ -0.47
RAX2Q96IS3 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAX2Q96IS3 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
RAX2Q96IS3 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RAX2Q96IS3 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAX2Q96IS3 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAX2Q96IS3 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
RAX2Q96IS3 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
RAX2Q96IS3 NSL1-201ENST00000366976 722 ntTSL 2 BASIC12.12□□□□□ -0.47
RAX2Q96IS3 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
RAX2Q96IS3 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
RAX2Q96IS3 FAM86LP-201ENST00000478302 853 ntBASIC12.12□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms