Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CHMP6Q96FZ7 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHMP6Q96FZ7 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CHMP6Q96FZ7 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHMP6Q96FZ7 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CHMP6Q96FZ7 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC15.66■□□□□ 0.1
CHMP6Q96FZ7 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHMP6Q96FZ7 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHMP6Q96FZ7 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CHMP6Q96FZ7 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHMP6Q96FZ7 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHMP6Q96FZ7 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHMP6Q96FZ7 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHMP6Q96FZ7 BNIP3P1-202ENST00000550043 1585 ntBASIC15.66■□□□□ 0.1
CHMP6Q96FZ7 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHMP6Q96FZ7 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHMP6Q96FZ7 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CHMP6Q96FZ7 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC15.65■□□□□ 0.1
CHMP6Q96FZ7 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CHMP6Q96FZ7 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CHMP6Q96FZ7 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHMP6Q96FZ7 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHMP6Q96FZ7 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHMP6Q96FZ7 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CHMP6Q96FZ7 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHMP6Q96FZ7 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHMP6Q96FZ7 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.65■□□□□ 0.1
CHMP6Q96FZ7 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC15.65■□□□□ 0.1
CHMP6Q96FZ7 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CHMP6Q96FZ7 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHMP6Q96FZ7 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CHMP6Q96FZ7 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.65■□□□□ 0.1
CHMP6Q96FZ7 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.65■□□□□ 0.1
CHMP6Q96FZ7 HMGA1P7-201ENST00000406908 502 ntBASIC15.65■□□□□ 0.1
CHMP6Q96FZ7 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CHMP6Q96FZ7 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC15.65■□□□□ 0.1
CHMP6Q96FZ7 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.65■□□□□ 0.1
CHMP6Q96FZ7 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.65■□□□□ 0.1
CHMP6Q96FZ7 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHMP6Q96FZ7 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.65■□□□□ 0.1
CHMP6Q96FZ7 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.65■□□□□ 0.1
CHMP6Q96FZ7 AC002347.1-201ENST00000569543 541 ntBASIC15.65■□□□□ 0.1
CHMP6Q96FZ7 FAM215A-202ENST00000632077 792 ntBASIC15.65■□□□□ 0.1
CHMP6Q96FZ7 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHMP6Q96FZ7 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHMP6Q96FZ7 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.65■□□□□ 0.1
CHMP6Q96FZ7 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CHMP6Q96FZ7 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC15.65■□□□□ 0.1
CHMP6Q96FZ7 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC15.65■□□□□ 0.1
CHMP6Q96FZ7 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHMP6Q96FZ7 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHMP6Q96FZ7 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC15.65■□□□□ 0.1
CHMP6Q96FZ7 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHMP6Q96FZ7 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC15.65■□□□□ 0.1
CHMP6Q96FZ7 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHMP6Q96FZ7 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHMP6Q96FZ7 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHMP6Q96FZ7 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC15.64■□□□□ 0.1
CHMP6Q96FZ7 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.1
CHMP6Q96FZ7 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CHMP6Q96FZ7 AC018529.2-202ENST00000611482 3087 ntBASIC15.64■□□□□ 0.09
CHMP6Q96FZ7 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHMP6Q96FZ7 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHMP6Q96FZ7 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC15.64■□□□□ 0.09
CHMP6Q96FZ7 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHMP6Q96FZ7 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.64■□□□□ 0.09
CHMP6Q96FZ7 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHMP6Q96FZ7 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CHMP6Q96FZ7 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHMP6Q96FZ7 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHMP6Q96FZ7 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHMP6Q96FZ7 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC15.64■□□□□ 0.09
CHMP6Q96FZ7 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC15.64■□□□□ 0.09
CHMP6Q96FZ7 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CHMP6Q96FZ7 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.64■□□□□ 0.09
CHMP6Q96FZ7 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHMP6Q96FZ7 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CHMP6Q96FZ7 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHMP6Q96FZ7 AL031284.1-201ENST00000419297 478 ntBASIC15.64■□□□□ 0.09
CHMP6Q96FZ7 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CHMP6Q96FZ7 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.64■□□□□ 0.09
CHMP6Q96FZ7 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC15.64■□□□□ 0.09
CHMP6Q96FZ7 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CHMP6Q96FZ7 AC108073.2-201ENST00000464002 357 ntBASIC15.64■□□□□ 0.09
CHMP6Q96FZ7 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.64■□□□□ 0.09
CHMP6Q96FZ7 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.64■□□□□ 0.09
CHMP6Q96FZ7 IGHV3-65-201ENST00000523210 341 ntBASIC15.64■□□□□ 0.09
CHMP6Q96FZ7 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.64■□□□□ 0.09
CHMP6Q96FZ7 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.64■□□□□ 0.09
CHMP6Q96FZ7 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.64■□□□□ 0.09
CHMP6Q96FZ7 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
CHMP6Q96FZ7 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.64■□□□□ 0.09
CHMP6Q96FZ7 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.64■□□□□ 0.09
CHMP6Q96FZ7 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CHMP6Q96FZ7 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CHMP6Q96FZ7 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.64■□□□□ 0.09
CHMP6Q96FZ7 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.64■□□□□ 0.09
CHMP6Q96FZ7 AC004790.2-201ENST00000623588 572 ntBASIC15.64■□□□□ 0.09
CHMP6Q96FZ7 AC117500.6-201ENST00000624871 588 ntBASIC15.64■□□□□ 0.09
CHMP6Q96FZ7 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms