Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM43Q96BQ3 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM43Q96BQ3 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC16.52■□□□□ 0.24
TRIM43Q96BQ3 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC16.52■□□□□ 0.24
TRIM43Q96BQ3 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC16.52■□□□□ 0.24
TRIM43Q96BQ3 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC16.52■□□□□ 0.24
TRIM43Q96BQ3 AC141586.1-203ENST00000567242 366 ntBASIC16.52■□□□□ 0.24
TRIM43Q96BQ3 AC026803.1-201ENST00000569130 274 ntBASIC16.52■□□□□ 0.24
TRIM43Q96BQ3 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC16.52■□□□□ 0.24
TRIM43Q96BQ3 MIR4649-201ENST00000582839 64 ntBASIC16.52■□□□□ 0.24
TRIM43Q96BQ3 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC16.52■□□□□ 0.24
TRIM43Q96BQ3 AL645728.2-202ENST00000641679 227 ntBASIC16.52■□□□□ 0.24
TRIM43Q96BQ3 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRIM43Q96BQ3 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.52■□□□□ 0.23
TRIM43Q96BQ3 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.52■□□□□ 0.23
TRIM43Q96BQ3 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRIM43Q96BQ3 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TRIM43Q96BQ3 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.23
TRIM43Q96BQ3 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRIM43Q96BQ3 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.52■□□□□ 0.23
TRIM43Q96BQ3 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
TRIM43Q96BQ3 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
TRIM43Q96BQ3 CAP2P1-201ENST00000557743 1390 ntBASIC16.51■□□□□ 0.23
TRIM43Q96BQ3 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM43Q96BQ3 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
TRIM43Q96BQ3 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM43Q96BQ3 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM43Q96BQ3 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM43Q96BQ3 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.51■□□□□ 0.23
TRIM43Q96BQ3 MBLAC2-202ENST00000514906 1936 ntBASIC16.51■□□□□ 0.23
TRIM43Q96BQ3 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
TRIM43Q96BQ3 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM43Q96BQ3 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TRIM43Q96BQ3 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM43Q96BQ3 AC011676.5-201ENST00000624864 2660 ntBASIC16.51■□□□□ 0.23
TRIM43Q96BQ3 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.51■□□□□ 0.23
TRIM43Q96BQ3 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.51■□□□□ 0.23
TRIM43Q96BQ3 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC16.51■□□□□ 0.23
TRIM43Q96BQ3 AP000356.3-201ENST00000382243 753 ntBASIC16.51■□□□□ 0.23
TRIM43Q96BQ3 MIR1227-201ENST00000408484 88 ntBASIC16.51■□□□□ 0.23
TRIM43Q96BQ3 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC16.51■□□□□ 0.23
TRIM43Q96BQ3 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC16.51■□□□□ 0.23
TRIM43Q96BQ3 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC16.51■□□□□ 0.23
TRIM43Q96BQ3 RN7SL67P-201ENST00000492147 296 ntBASIC16.51■□□□□ 0.23
TRIM43Q96BQ3 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM43Q96BQ3 STUB1-204ENST00000564370 875 ntTSL 2 BASIC16.51■□□□□ 0.23
TRIM43Q96BQ3 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
TRIM43Q96BQ3 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC16.51■□□□□ 0.23
TRIM43Q96BQ3 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM43Q96BQ3 AC127024.7-201ENST00000625101 200 ntBASIC16.51■□□□□ 0.23
TRIM43Q96BQ3 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM43Q96BQ3 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.51■□□□□ 0.23
TRIM43Q96BQ3 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM43Q96BQ3 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TRIM43Q96BQ3 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.51■□□□□ 0.23
TRIM43Q96BQ3 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TRIM43Q96BQ3 AC020916.1-201ENST00000587762 1774 ntBASIC16.51■□□□□ 0.23
TRIM43Q96BQ3 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM43Q96BQ3 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM43Q96BQ3 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM43Q96BQ3 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM43Q96BQ3 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM43Q96BQ3 FAM90A7P-201ENST00000382628 1395 ntBASIC16.51■□□□□ 0.23
TRIM43Q96BQ3 FAM90A23P-201ENST00000400136 1395 ntBASIC16.51■□□□□ 0.23
TRIM43Q96BQ3 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM43Q96BQ3 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM43Q96BQ3 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM43Q96BQ3 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
TRIM43Q96BQ3 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM43Q96BQ3 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
TRIM43Q96BQ3 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM43Q96BQ3 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM43Q96BQ3 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM43Q96BQ3 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM43Q96BQ3 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM43Q96BQ3 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM43Q96BQ3 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM43Q96BQ3 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM43Q96BQ3 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
TRIM43Q96BQ3 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM43Q96BQ3 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM43Q96BQ3 AC239868.1-201ENST00000369385 493 ntBASIC16.5■□□□□ 0.23
TRIM43Q96BQ3 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM43Q96BQ3 FAM58BP-201ENST00000439056 645 ntBASIC16.5■□□□□ 0.23
TRIM43Q96BQ3 RN7SL258P-201ENST00000478664 300 ntBASIC16.5■□□□□ 0.23
TRIM43Q96BQ3 SCARNA21-201ENST00000517026 139 ntBASIC16.5■□□□□ 0.23
TRIM43Q96BQ3 AC005357.2-202ENST00000590507 1060 ntBASIC16.5■□□□□ 0.23
TRIM43Q96BQ3 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC16.5■□□□□ 0.23
TRIM43Q96BQ3 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC16.5■□□□□ 0.23
TRIM43Q96BQ3 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM43Q96BQ3 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC16.5■□□□□ 0.23
TRIM43Q96BQ3 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM43Q96BQ3 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM43Q96BQ3 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.5■□□□□ 0.23
TRIM43Q96BQ3 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM43Q96BQ3 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM43Q96BQ3 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM43Q96BQ3 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.5■□□□□ 0.23
TRIM43Q96BQ3 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRIM43Q96BQ3 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms