Protein–RNA interactions for Protein: Q969H4

CNKSR1, Connector enhancer of kinase suppressor of ras 1, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1Q969H4 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNKSR1Q969H4 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC18.66■□□□□ 0.58
CNKSR1Q969H4 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CNKSR1Q969H4 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC18.66■□□□□ 0.58
CNKSR1Q969H4 AC114501.1-201ENST00000445949 172 ntBASIC18.66■□□□□ 0.58
CNKSR1Q969H4 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC18.66■□□□□ 0.58
CNKSR1Q969H4 NPM1P43-201ENST00000558669 786 ntBASIC18.66■□□□□ 0.58
CNKSR1Q969H4 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC18.66■□□□□ 0.58
CNKSR1Q969H4 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNKSR1Q969H4 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNKSR1Q969H4 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNKSR1Q969H4 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNKSR1Q969H4 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC18.66■□□□□ 0.58
CNKSR1Q969H4 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC18.66■□□□□ 0.58
CNKSR1Q969H4 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CNKSR1Q969H4 PCDHA12-202ENST00000613593 2588 ntBASIC18.66■□□□□ 0.58
CNKSR1Q969H4 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CNKSR1Q969H4 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNKSR1Q969H4 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
CNKSR1Q969H4 AC011676.5-201ENST00000624864 2660 ntBASIC18.66■□□□□ 0.58
CNKSR1Q969H4 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNKSR1Q969H4 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CNKSR1Q969H4 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNKSR1Q969H4 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNKSR1Q969H4 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CNKSR1Q969H4 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CNKSR1Q969H4 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNKSR1Q969H4 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CNKSR1Q969H4 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CNKSR1Q969H4 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC18.65■□□□□ 0.58
CNKSR1Q969H4 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNKSR1Q969H4 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CNKSR1Q969H4 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNKSR1Q969H4 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CNKSR1Q969H4 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC18.65■□□□□ 0.58
CNKSR1Q969H4 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC18.65■□□□□ 0.58
CNKSR1Q969H4 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
CNKSR1Q969H4 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNKSR1Q969H4 AK6-201ENST00000380818 1183 ntTSL 2 BASIC18.65■□□□□ 0.58
CNKSR1Q969H4 LBH-202ENST00000401506 485 ntTSL 3 BASIC18.65■□□□□ 0.58
CNKSR1Q969H4 RCC2P8-201ENST00000502779 1035 ntBASIC18.65■□□□□ 0.58
CNKSR1Q969H4 AC026434.2-201ENST00000506094 1078 ntBASIC18.65■□□□□ 0.58
CNKSR1Q969H4 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC18.65■□□□□ 0.58
CNKSR1Q969H4 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
CNKSR1Q969H4 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC18.65■□□□□ 0.58
CNKSR1Q969H4 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC18.65■□□□□ 0.58
CNKSR1Q969H4 MIR4754-201ENST00000582477 89 ntBASIC18.65■□□□□ 0.58
CNKSR1Q969H4 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC18.65■□□□□ 0.58
CNKSR1Q969H4 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC18.65■□□□□ 0.58
CNKSR1Q969H4 HLA-C-210ENST00000640219 976 ntBASIC18.65■□□□□ 0.58
CNKSR1Q969H4 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNKSR1Q969H4 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CNKSR1Q969H4 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNKSR1Q969H4 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CNKSR1Q969H4 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNKSR1Q969H4 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNKSR1Q969H4 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNKSR1Q969H4 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CNKSR1Q969H4 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC18.65■□□□□ 0.58
CNKSR1Q969H4 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNKSR1Q969H4 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.65■□□□□ 0.58
CNKSR1Q969H4 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.65■□□□□ 0.58
CNKSR1Q969H4 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNKSR1Q969H4 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CNKSR1Q969H4 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
CNKSR1Q969H4 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CNKSR1Q969H4 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CNKSR1Q969H4 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNKSR1Q969H4 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC18.64■□□□□ 0.57
CNKSR1Q969H4 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNKSR1Q969H4 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CNKSR1Q969H4 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.64■□□□□ 0.57
CNKSR1Q969H4 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNKSR1Q969H4 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CNKSR1Q969H4 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNKSR1Q969H4 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNKSR1Q969H4 AC010141.1-201ENST00000411585 623 ntBASIC18.64■□□□□ 0.57
CNKSR1Q969H4 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CNKSR1Q969H4 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC18.64■□□□□ 0.57
CNKSR1Q969H4 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC18.64■□□□□ 0.57
CNKSR1Q969H4 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CNKSR1Q969H4 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC18.64■□□□□ 0.57
CNKSR1Q969H4 NEU3-205ENST00000531619 582 ntTSL 5 BASIC18.64■□□□□ 0.57
CNKSR1Q969H4 AC009779.1-201ENST00000551138 283 ntBASIC18.64■□□□□ 0.57
CNKSR1Q969H4 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC18.64■□□□□ 0.57
CNKSR1Q969H4 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CNKSR1Q969H4 WDR7-208ENST00000589935 544 ntTSL 4 BASIC18.64■□□□□ 0.57
CNKSR1Q969H4 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CNKSR1Q969H4 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC18.64■□□□□ 0.57
CNKSR1Q969H4 IRF3-215ENST00000596822 823 ntTSL 3 BASIC18.64■□□□□ 0.57
CNKSR1Q969H4 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNKSR1Q969H4 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
CNKSR1Q969H4 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC18.64■□□□□ 0.57
CNKSR1Q969H4 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CNKSR1Q969H4 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CNKSR1Q969H4 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNKSR1Q969H4 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CNKSR1Q969H4 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNKSR1Q969H4 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18.64■□□□□ 0.57
CNKSR1Q969H4 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms