Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 AC023090.2-201ENST00000625182 2110 ntBASIC13.26□□□□□ -0.29
SMIM4Q8WVI0 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC13.26□□□□□ -0.29
SMIM4Q8WVI0 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SMIM4Q8WVI0 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SMIM4Q8WVI0 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
SMIM4Q8WVI0 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SMIM4Q8WVI0 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SMIM4Q8WVI0 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SMIM4Q8WVI0 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SMIM4Q8WVI0 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.26□□□□□ -0.29
SMIM4Q8WVI0 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SMIM4Q8WVI0 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SMIM4Q8WVI0 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SMIM4Q8WVI0 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
SMIM4Q8WVI0 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SMIM4Q8WVI0 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
SMIM4Q8WVI0 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SMIM4Q8WVI0 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SMIM4Q8WVI0 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.25□□□□□ -0.29
SMIM4Q8WVI0 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
SMIM4Q8WVI0 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.25□□□□□ -0.29
SMIM4Q8WVI0 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
SMIM4Q8WVI0 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
SMIM4Q8WVI0 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
SMIM4Q8WVI0 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SMIM4Q8WVI0 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SMIM4Q8WVI0 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SMIM4Q8WVI0 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
SMIM4Q8WVI0 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SMIM4Q8WVI0 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.25□□□□□ -0.29
SMIM4Q8WVI0 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SMIM4Q8WVI0 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SMIM4Q8WVI0 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
SMIM4Q8WVI0 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
SMIM4Q8WVI0 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SMIM4Q8WVI0 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SMIM4Q8WVI0 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SMIM4Q8WVI0 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SMIM4Q8WVI0 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
SMIM4Q8WVI0 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SMIM4Q8WVI0 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SMIM4Q8WVI0 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SMIM4Q8WVI0 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC13.25□□□□□ -0.29
SMIM4Q8WVI0 AC136604.1-201ENST00000418535 575 ntBASIC13.25□□□□□ -0.29
SMIM4Q8WVI0 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC13.25□□□□□ -0.29
SMIM4Q8WVI0 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
SMIM4Q8WVI0 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC13.25□□□□□ -0.29
SMIM4Q8WVI0 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC13.25□□□□□ -0.29
SMIM4Q8WVI0 REXO1L6P-202ENST00000619970 1078 ntBASIC13.25□□□□□ -0.29
SMIM4Q8WVI0 AC008735.5-201ENST00000623544 497 ntBASIC13.25□□□□□ -0.29
SMIM4Q8WVI0 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SMIM4Q8WVI0 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SMIM4Q8WVI0 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.25□□□□□ -0.29
SMIM4Q8WVI0 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.25□□□□□ -0.29
SMIM4Q8WVI0 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SMIM4Q8WVI0 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
SMIM4Q8WVI0 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SMIM4Q8WVI0 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
SMIM4Q8WVI0 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SMIM4Q8WVI0 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
SMIM4Q8WVI0 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SMIM4Q8WVI0 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
SMIM4Q8WVI0 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
SMIM4Q8WVI0 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.24□□□□□ -0.29
SMIM4Q8WVI0 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SMIM4Q8WVI0 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.24□□□□□ -0.29
SMIM4Q8WVI0 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
SMIM4Q8WVI0 CYP4F24P-201ENST00000586049 1580 ntBASIC13.24□□□□□ -0.29
SMIM4Q8WVI0 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SMIM4Q8WVI0 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
SMIM4Q8WVI0 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SMIM4Q8WVI0 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC13.24□□□□□ -0.29
SMIM4Q8WVI0 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.24□□□□□ -0.29
SMIM4Q8WVI0 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SMIM4Q8WVI0 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
SMIM4Q8WVI0 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SMIM4Q8WVI0 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SMIM4Q8WVI0 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.24□□□□□ -0.29
SMIM4Q8WVI0 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SMIM4Q8WVI0 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SMIM4Q8WVI0 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.24□□□□□ -0.29
SMIM4Q8WVI0 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SMIM4Q8WVI0 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC13.24□□□□□ -0.29
SMIM4Q8WVI0 RPS2P1-201ENST00000434010 821 ntBASIC13.24□□□□□ -0.29
SMIM4Q8WVI0 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC13.24□□□□□ -0.29
SMIM4Q8WVI0 RPS29-206ENST00000557111 488 ntTSL 2 BASIC13.24□□□□□ -0.29
SMIM4Q8WVI0 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC13.24□□□□□ -0.29
SMIM4Q8WVI0 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC13.24□□□□□ -0.29
SMIM4Q8WVI0 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SMIM4Q8WVI0 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.24□□□□□ -0.29
SMIM4Q8WVI0 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
SMIM4Q8WVI0 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SMIM4Q8WVI0 AC027612.1-201ENST00000445234 2395 ntBASIC13.24□□□□□ -0.29
SMIM4Q8WVI0 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.24□□□□□ -0.29
SMIM4Q8WVI0 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
SMIM4Q8WVI0 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
SMIM4Q8WVI0 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
SMIM4Q8WVI0 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
SMIM4Q8WVI0 AL607033.1-201ENST00000623900 1599 ntBASIC13.24□□□□□ -0.29
SMIM4Q8WVI0 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms