Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SHKBP1Q8TBC3 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SHKBP1Q8TBC3 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC16.21■□□□□ 0.19
SHKBP1Q8TBC3 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC16.21■□□□□ 0.19
SHKBP1Q8TBC3 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.21■□□□□ 0.19
SHKBP1Q8TBC3 AC079316.1-201ENST00000548397 411 ntBASIC16.21■□□□□ 0.19
SHKBP1Q8TBC3 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SHKBP1Q8TBC3 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC16.21■□□□□ 0.19
SHKBP1Q8TBC3 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC16.21■□□□□ 0.19
SHKBP1Q8TBC3 AC025279.2-201ENST00000569730 653 ntBASIC16.21■□□□□ 0.19
SHKBP1Q8TBC3 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC16.21■□□□□ 0.19
SHKBP1Q8TBC3 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SHKBP1Q8TBC3 AC009542.2-202ENST00000619004 1067 ntBASIC16.21■□□□□ 0.19
SHKBP1Q8TBC3 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC16.21■□□□□ 0.19
SHKBP1Q8TBC3 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHKBP1Q8TBC3 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHKBP1Q8TBC3 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHKBP1Q8TBC3 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.21■□□□□ 0.19
SHKBP1Q8TBC3 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHKBP1Q8TBC3 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHKBP1Q8TBC3 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
SHKBP1Q8TBC3 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHKBP1Q8TBC3 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SHKBP1Q8TBC3 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SHKBP1Q8TBC3 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
SHKBP1Q8TBC3 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.21■□□□□ 0.18
SHKBP1Q8TBC3 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
SHKBP1Q8TBC3 AL138799.1-201ENST00000448213 1675 ntBASIC16.21■□□□□ 0.18
SHKBP1Q8TBC3 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SHKBP1Q8TBC3 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SHKBP1Q8TBC3 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
SHKBP1Q8TBC3 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHKBP1Q8TBC3 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
SHKBP1Q8TBC3 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SHKBP1Q8TBC3 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
SHKBP1Q8TBC3 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SHKBP1Q8TBC3 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.2■□□□□ 0.18
SHKBP1Q8TBC3 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SHKBP1Q8TBC3 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.2■□□□□ 0.18
SHKBP1Q8TBC3 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.2■□□□□ 0.18
SHKBP1Q8TBC3 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.2■□□□□ 0.18
SHKBP1Q8TBC3 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SHKBP1Q8TBC3 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHKBP1Q8TBC3 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SHKBP1Q8TBC3 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHKBP1Q8TBC3 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHKBP1Q8TBC3 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.2■□□□□ 0.18
SHKBP1Q8TBC3 CNN2P8-201ENST00000421872 913 ntBASIC16.2■□□□□ 0.18
SHKBP1Q8TBC3 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC16.2■□□□□ 0.18
SHKBP1Q8TBC3 YBX1P6-201ENST00000442962 1002 ntBASIC16.2■□□□□ 0.18
SHKBP1Q8TBC3 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC16.2■□□□□ 0.18
SHKBP1Q8TBC3 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC16.2■□□□□ 0.18
SHKBP1Q8TBC3 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.2■□□□□ 0.18
SHKBP1Q8TBC3 AP005019.2-201ENST00000615104 511 ntBASIC16.2■□□□□ 0.18
SHKBP1Q8TBC3 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC16.2■□□□□ 0.18
SHKBP1Q8TBC3 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHKBP1Q8TBC3 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
SHKBP1Q8TBC3 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHKBP1Q8TBC3 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHKBP1Q8TBC3 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHKBP1Q8TBC3 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHKBP1Q8TBC3 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHKBP1Q8TBC3 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHKBP1Q8TBC3 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SHKBP1Q8TBC3 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.2■□□□□ 0.18
SHKBP1Q8TBC3 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHKBP1Q8TBC3 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SHKBP1Q8TBC3 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SHKBP1Q8TBC3 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.2■□□□□ 0.18
SHKBP1Q8TBC3 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SHKBP1Q8TBC3 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SHKBP1Q8TBC3 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.19■□□□□ 0.18
SHKBP1Q8TBC3 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SHKBP1Q8TBC3 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SHKBP1Q8TBC3 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SHKBP1Q8TBC3 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SHKBP1Q8TBC3 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SHKBP1Q8TBC3 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
SHKBP1Q8TBC3 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SHKBP1Q8TBC3 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.19■□□□□ 0.18
SHKBP1Q8TBC3 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SHKBP1Q8TBC3 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SHKBP1Q8TBC3 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SHKBP1Q8TBC3 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SHKBP1Q8TBC3 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SHKBP1Q8TBC3 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SHKBP1Q8TBC3 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SHKBP1Q8TBC3 PPT1-215ENST00000641471 2368 ntBASIC16.19■□□□□ 0.18
SHKBP1Q8TBC3 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SHKBP1Q8TBC3 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.19■□□□□ 0.18
SHKBP1Q8TBC3 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
SHKBP1Q8TBC3 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SHKBP1Q8TBC3 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC16.19■□□□□ 0.18
SHKBP1Q8TBC3 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC16.19■□□□□ 0.18
SHKBP1Q8TBC3 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC16.19■□□□□ 0.18
SHKBP1Q8TBC3 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC16.19■□□□□ 0.18
SHKBP1Q8TBC3 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC16.19■□□□□ 0.18
SHKBP1Q8TBC3 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC16.19■□□□□ 0.18
SHKBP1Q8TBC3 AC108725.1-201ENST00000495472 409 ntBASIC16.19■□□□□ 0.18
SHKBP1Q8TBC3 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms