Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCDH19Q8TAB3 AC100756.1-201ENST00000562736 682 ntBASIC15.96■□□□□ 0.15
PCDH19Q8TAB3 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDH19Q8TAB3 AC138749.3-201ENST00000567691 622 ntBASIC15.96■□□□□ 0.15
PCDH19Q8TAB3 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDH19Q8TAB3 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDH19Q8TAB3 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCDH19Q8TAB3 AC116165.1-201ENST00000611806 668 ntBASIC15.96■□□□□ 0.15
PCDH19Q8TAB3 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC15.96■□□□□ 0.15
PCDH19Q8TAB3 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.96■□□□□ 0.15
PCDH19Q8TAB3 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.96■□□□□ 0.15
PCDH19Q8TAB3 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCDH19Q8TAB3 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCDH19Q8TAB3 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDH19Q8TAB3 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDH19Q8TAB3 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.96■□□□□ 0.15
PCDH19Q8TAB3 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
PCDH19Q8TAB3 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
PCDH19Q8TAB3 REXO1L4P-201ENST00000605109 1937 ntBASIC15.96■□□□□ 0.14
PCDH19Q8TAB3 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH19Q8TAB3 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH19Q8TAB3 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDH19Q8TAB3 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH19Q8TAB3 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDH19Q8TAB3 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH19Q8TAB3 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH19Q8TAB3 ACE3P-201ENST00000423435 1973 ntBASIC15.95■□□□□ 0.14
PCDH19Q8TAB3 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
PCDH19Q8TAB3 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH19Q8TAB3 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH19Q8TAB3 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH19Q8TAB3 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH19Q8TAB3 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH19Q8TAB3 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH19Q8TAB3 CRB3P1-201ENST00000449338 276 ntBASIC15.95■□□□□ 0.14
PCDH19Q8TAB3 GAPDHP40-201ENST00000505218 1006 ntBASIC15.95■□□□□ 0.14
PCDH19Q8TAB3 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.95■□□□□ 0.14
PCDH19Q8TAB3 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH19Q8TAB3 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
PCDH19Q8TAB3 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.95■□□□□ 0.14
PCDH19Q8TAB3 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
PCDH19Q8TAB3 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
PCDH19Q8TAB3 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH19Q8TAB3 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
PCDH19Q8TAB3 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDH19Q8TAB3 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH19Q8TAB3 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH19Q8TAB3 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH19Q8TAB3 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH19Q8TAB3 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH19Q8TAB3 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH19Q8TAB3 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH19Q8TAB3 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH19Q8TAB3 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
PCDH19Q8TAB3 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH19Q8TAB3 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH19Q8TAB3 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH19Q8TAB3 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDH19Q8TAB3 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH19Q8TAB3 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
PCDH19Q8TAB3 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.94■□□□□ 0.14
PCDH19Q8TAB3 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH19Q8TAB3 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH19Q8TAB3 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.94■□□□□ 0.14
PCDH19Q8TAB3 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH19Q8TAB3 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDH19Q8TAB3 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
PCDH19Q8TAB3 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH19Q8TAB3 WBP2-203ENST00000433525 928 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDH19Q8TAB3 GNAQP1-201ENST00000444815 1067 ntBASIC15.94■□□□□ 0.14
PCDH19Q8TAB3 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDH19Q8TAB3 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDH19Q8TAB3 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.94■□□□□ 0.14
PCDH19Q8TAB3 DOC2GP-202ENST00000514950 1163 ntBASIC15.94■□□□□ 0.14
PCDH19Q8TAB3 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDH19Q8TAB3 RARRES2P5-201ENST00000564013 466 ntBASIC15.94■□□□□ 0.14
PCDH19Q8TAB3 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.94■□□□□ 0.14
PCDH19Q8TAB3 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
PCDH19Q8TAB3 AC004233.3-201ENST00000607794 1269 ntBASIC15.94■□□□□ 0.14
PCDH19Q8TAB3 AL035252.4-201ENST00000624174 288 ntBASIC15.94■□□□□ 0.14
PCDH19Q8TAB3 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH19Q8TAB3 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDH19Q8TAB3 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH19Q8TAB3 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
PCDH19Q8TAB3 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH19Q8TAB3 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDH19Q8TAB3 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
PCDH19Q8TAB3 CICP23-201ENST00000605013 2741 ntBASIC15.94■□□□□ 0.14
PCDH19Q8TAB3 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH19Q8TAB3 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH19Q8TAB3 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH19Q8TAB3 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH19Q8TAB3 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH19Q8TAB3 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH19Q8TAB3 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
PCDH19Q8TAB3 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH19Q8TAB3 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH19Q8TAB3 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH19Q8TAB3 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH19Q8TAB3 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms