Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 RPL13AP23-201ENST00000480739 586 ntBASIC15.36■□□□□ 0.05
RFWD2Q8NHY2 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.36■□□□□ 0.05
RFWD2Q8NHY2 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.36■□□□□ 0.05
RFWD2Q8NHY2 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RFWD2Q8NHY2 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RFWD2Q8NHY2 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
RFWD2Q8NHY2 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.36■□□□□ 0.05
RFWD2Q8NHY2 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RFWD2Q8NHY2 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.36■□□□□ 0.05
RFWD2Q8NHY2 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RFWD2Q8NHY2 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RFWD2Q8NHY2 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
RFWD2Q8NHY2 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RFWD2Q8NHY2 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
RFWD2Q8NHY2 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
RFWD2Q8NHY2 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RFWD2Q8NHY2 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
RFWD2Q8NHY2 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RFWD2Q8NHY2 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC15.35■□□□□ 0.05
RFWD2Q8NHY2 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.35■□□□□ 0.05
RFWD2Q8NHY2 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RFWD2Q8NHY2 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RFWD2Q8NHY2 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
RFWD2Q8NHY2 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.35■□□□□ 0.05
RFWD2Q8NHY2 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC15.35■□□□□ 0.05
RFWD2Q8NHY2 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
RFWD2Q8NHY2 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RFWD2Q8NHY2 BEND3P1-201ENST00000421591 1944 ntBASIC15.35■□□□□ 0.05
RFWD2Q8NHY2 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.35■□□□□ 0.05
RFWD2Q8NHY2 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC15.35■□□□□ 0.05
RFWD2Q8NHY2 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RFWD2Q8NHY2 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RFWD2Q8NHY2 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RFWD2Q8NHY2 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.35■□□□□ 0.05
RFWD2Q8NHY2 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
RFWD2Q8NHY2 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
RFWD2Q8NHY2 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RFWD2Q8NHY2 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RFWD2Q8NHY2 FOXO1B-201ENST00000504678 1527 ntBASIC15.35■□□□□ 0.05
RFWD2Q8NHY2 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RFWD2Q8NHY2 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.35■□□□□ 0.05
RFWD2Q8NHY2 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
RFWD2Q8NHY2 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RFWD2Q8NHY2 AC007967.2-201ENST00000432613 625 ntBASIC15.35■□□□□ 0.05
RFWD2Q8NHY2 AC140658.5-201ENST00000438532 169 ntBASIC15.35■□□□□ 0.05
RFWD2Q8NHY2 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.35■□□□□ 0.05
RFWD2Q8NHY2 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.35■□□□□ 0.05
RFWD2Q8NHY2 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.35■□□□□ 0.05
RFWD2Q8NHY2 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.35■□□□□ 0.05
RFWD2Q8NHY2 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.35■□□□□ 0.05
RFWD2Q8NHY2 HNRNPUP1-201ENST00000554987 333 ntBASIC15.35■□□□□ 0.05
RFWD2Q8NHY2 AL138918.1-201ENST00000568306 659 ntBASIC15.35■□□□□ 0.05
RFWD2Q8NHY2 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC15.35■□□□□ 0.05
RFWD2Q8NHY2 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.35■□□□□ 0.05
RFWD2Q8NHY2 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.35■□□□□ 0.05
RFWD2Q8NHY2 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.35■□□□□ 0.05
RFWD2Q8NHY2 AC010507.1-201ENST00000633895 436 ntBASIC15.35■□□□□ 0.05
RFWD2Q8NHY2 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC15.35■□□□□ 0.05
RFWD2Q8NHY2 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
RFWD2Q8NHY2 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RFWD2Q8NHY2 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RFWD2Q8NHY2 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RFWD2Q8NHY2 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RFWD2Q8NHY2 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RFWD2Q8NHY2 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RFWD2Q8NHY2 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
RFWD2Q8NHY2 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.35■□□□□ 0.05
RFWD2Q8NHY2 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RFWD2Q8NHY2 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
RFWD2Q8NHY2 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
RFWD2Q8NHY2 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
RFWD2Q8NHY2 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RFWD2Q8NHY2 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RFWD2Q8NHY2 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.34■□□□□ 0.05
RFWD2Q8NHY2 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RFWD2Q8NHY2 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RFWD2Q8NHY2 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFWD2Q8NHY2 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
RFWD2Q8NHY2 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RFWD2Q8NHY2 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFWD2Q8NHY2 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RFWD2Q8NHY2 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RFWD2Q8NHY2 AP000845.1-201ENST00000581677 2131 ntBASIC15.34■□□□□ 0.05
RFWD2Q8NHY2 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.34■□□□□ 0.05
RFWD2Q8NHY2 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RFWD2Q8NHY2 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.34■□□□□ 0.05
RFWD2Q8NHY2 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RFWD2Q8NHY2 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFWD2Q8NHY2 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFWD2Q8NHY2 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
RFWD2Q8NHY2 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFWD2Q8NHY2 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFWD2Q8NHY2 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFWD2Q8NHY2 AC098859.1-201ENST00000502915 1238 ntBASIC15.34■□□□□ 0.05
RFWD2Q8NHY2 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.34■□□□□ 0.05
RFWD2Q8NHY2 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.34■□□□□ 0.05
RFWD2Q8NHY2 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC15.34■□□□□ 0.05
RFWD2Q8NHY2 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RFWD2Q8NHY2 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.34■□□□□ 0.05
RFWD2Q8NHY2 AC024267.1-201ENST00000582320 895 ntBASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms