Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.8□□□□□ -0.04
SRFBP1Q8NEF9 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.8□□□□□ -0.04
SRFBP1Q8NEF9 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
SRFBP1Q8NEF9 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SRFBP1Q8NEF9 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SRFBP1Q8NEF9 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SRFBP1Q8NEF9 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SRFBP1Q8NEF9 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SRFBP1Q8NEF9 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SRFBP1Q8NEF9 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SRFBP1Q8NEF9 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SRFBP1Q8NEF9 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SRFBP1Q8NEF9 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.8□□□□□ -0.04
SRFBP1Q8NEF9 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SRFBP1Q8NEF9 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SRFBP1Q8NEF9 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SRFBP1Q8NEF9 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.8□□□□□ -0.04
SRFBP1Q8NEF9 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SRFBP1Q8NEF9 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SRFBP1Q8NEF9 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
SRFBP1Q8NEF9 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SRFBP1Q8NEF9 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
SRFBP1Q8NEF9 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRFBP1Q8NEF9 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRFBP1Q8NEF9 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRFBP1Q8NEF9 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
SRFBP1Q8NEF9 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRFBP1Q8NEF9 AC097376.2-205ENST00000610159 5334 ntBASIC14.79□□□□□ -0.04
SRFBP1Q8NEF9 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SRFBP1Q8NEF9 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.79□□□□□ -0.04
SRFBP1Q8NEF9 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SRFBP1Q8NEF9 SPDYE19P-201ENST00000338590 713 ntBASIC14.79□□□□□ -0.04
SRFBP1Q8NEF9 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
SRFBP1Q8NEF9 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRFBP1Q8NEF9 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRFBP1Q8NEF9 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRFBP1Q8NEF9 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRFBP1Q8NEF9 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRFBP1Q8NEF9 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.79□□□□□ -0.04
SRFBP1Q8NEF9 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRFBP1Q8NEF9 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SRFBP1Q8NEF9 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRFBP1Q8NEF9 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SRFBP1Q8NEF9 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SRFBP1Q8NEF9 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.79□□□□□ -0.04
SRFBP1Q8NEF9 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRFBP1Q8NEF9 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.79□□□□□ -0.04
SRFBP1Q8NEF9 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.79□□□□□ -0.04
SRFBP1Q8NEF9 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SRFBP1Q8NEF9 AL391825.1-201ENST00000457671 1364 ntBASIC14.79□□□□□ -0.04
SRFBP1Q8NEF9 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SRFBP1Q8NEF9 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SRFBP1Q8NEF9 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
SRFBP1Q8NEF9 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SRFBP1Q8NEF9 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.79□□□□□ -0.04
SRFBP1Q8NEF9 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.79□□□□□ -0.04
SRFBP1Q8NEF9 AC025181.2-201ENST00000606994 802 ntBASIC14.79□□□□□ -0.04
SRFBP1Q8NEF9 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.79□□□□□ -0.04
SRFBP1Q8NEF9 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.79□□□□□ -0.04
SRFBP1Q8NEF9 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.79□□□□□ -0.04
SRFBP1Q8NEF9 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
SRFBP1Q8NEF9 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.79□□□□□ -0.04
SRFBP1Q8NEF9 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.79□□□□□ -0.04
SRFBP1Q8NEF9 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRFBP1Q8NEF9 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRFBP1Q8NEF9 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
SRFBP1Q8NEF9 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SRFBP1Q8NEF9 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRFBP1Q8NEF9 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.78□□□□□ -0.04
SRFBP1Q8NEF9 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRFBP1Q8NEF9 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SRFBP1Q8NEF9 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRFBP1Q8NEF9 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SRFBP1Q8NEF9 AC023157.3-201ENST00000619086 2088 ntBASIC14.78□□□□□ -0.04
SRFBP1Q8NEF9 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.78□□□□□ -0.04
SRFBP1Q8NEF9 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SRFBP1Q8NEF9 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SRFBP1Q8NEF9 AC148477.4-201ENST00000613430 1793 ntBASIC14.78□□□□□ -0.04
SRFBP1Q8NEF9 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.78□□□□□ -0.04
SRFBP1Q8NEF9 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.78□□□□□ -0.04
SRFBP1Q8NEF9 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SRFBP1Q8NEF9 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SRFBP1Q8NEF9 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRFBP1Q8NEF9 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SRFBP1Q8NEF9 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.78□□□□□ -0.04
SRFBP1Q8NEF9 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRFBP1Q8NEF9 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SRFBP1Q8NEF9 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRFBP1Q8NEF9 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRFBP1Q8NEF9 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.78□□□□□ -0.04
SRFBP1Q8NEF9 TSPY16P-201ENST00000449843 468 ntBASIC14.78□□□□□ -0.04
SRFBP1Q8NEF9 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SRFBP1Q8NEF9 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.78□□□□□ -0.04
SRFBP1Q8NEF9 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.78□□□□□ -0.04
SRFBP1Q8NEF9 SPDYE18-201ENST00000510091 1050 ntBASIC14.78□□□□□ -0.04
SRFBP1Q8NEF9 AC104596.2-201ENST00000512793 793 ntBASIC14.78□□□□□ -0.04
SRFBP1Q8NEF9 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.78□□□□□ -0.04
SRFBP1Q8NEF9 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.78□□□□□ -0.04
SRFBP1Q8NEF9 AC055876.2-201ENST00000531834 546 ntBASIC14.78□□□□□ -0.04
SRFBP1Q8NEF9 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms