Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
EFCAB3Q8N7B9 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
EFCAB3Q8N7B9 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
EFCAB3Q8N7B9 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
EFCAB3Q8N7B9 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
EFCAB3Q8N7B9 GK-202ENST00000378941 458 ntTSL 3 BASIC15.67■□□□□ 0.1
EFCAB3Q8N7B9 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.67■□□□□ 0.1
EFCAB3Q8N7B9 AC002056.1-201ENST00000395613 760 ntBASIC15.67■□□□□ 0.1
EFCAB3Q8N7B9 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.67■□□□□ 0.1
EFCAB3Q8N7B9 USP9YP19-201ENST00000412165 485 ntBASIC15.67■□□□□ 0.1
EFCAB3Q8N7B9 DCUN1D2-AS-201ENST00000414992 330 ntTSL 3 BASIC15.67■□□□□ 0.1
EFCAB3Q8N7B9 AC015922.1-201ENST00000421102 1152 ntBASIC15.67■□□□□ 0.1
EFCAB3Q8N7B9 AL133417.1-201ENST00000425290 688 ntTSL 5 BASIC15.67■□□□□ 0.1
EFCAB3Q8N7B9 AC096732.1-201ENST00000439565 477 ntTSL 3 BASIC15.67■□□□□ 0.1
EFCAB3Q8N7B9 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC15.67■□□□□ 0.1
EFCAB3Q8N7B9 VN1R48P-201ENST00000448149 1036 ntBASIC15.67■□□□□ 0.1
EFCAB3Q8N7B9 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.67■□□□□ 0.1
EFCAB3Q8N7B9 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
EFCAB3Q8N7B9 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
EFCAB3Q8N7B9 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
EFCAB3Q8N7B9 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
EFCAB3Q8N7B9 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC15.67■□□□□ 0.1
EFCAB3Q8N7B9 AC093520.2-201ENST00000561830 333 ntBASIC15.67■□□□□ 0.1
EFCAB3Q8N7B9 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.67■□□□□ 0.1
EFCAB3Q8N7B9 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.67■□□□□ 0.1
EFCAB3Q8N7B9 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.67■□□□□ 0.1
EFCAB3Q8N7B9 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.67■□□□□ 0.1
EFCAB3Q8N7B9 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
EFCAB3Q8N7B9 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.67■□□□□ 0.1
EFCAB3Q8N7B9 TMBIM7P-203ENST00000641617 1718 ntBASIC15.67■□□□□ 0.1
EFCAB3Q8N7B9 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
EFCAB3Q8N7B9 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
EFCAB3Q8N7B9 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
EFCAB3Q8N7B9 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
EFCAB3Q8N7B9 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
EFCAB3Q8N7B9 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.67■□□□□ 0.1
EFCAB3Q8N7B9 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
EFCAB3Q8N7B9 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
EFCAB3Q8N7B9 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.67■□□□□ 0.1
EFCAB3Q8N7B9 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.67■□□□□ 0.1
EFCAB3Q8N7B9 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
EFCAB3Q8N7B9 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
EFCAB3Q8N7B9 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
EFCAB3Q8N7B9 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
EFCAB3Q8N7B9 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
EFCAB3Q8N7B9 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
EFCAB3Q8N7B9 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.67■□□□□ 0.1
EFCAB3Q8N7B9 AC100757.3-201ENST00000622361 1406 ntBASIC15.67■□□□□ 0.1
EFCAB3Q8N7B9 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
EFCAB3Q8N7B9 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.67■□□□□ 0.1
EFCAB3Q8N7B9 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.67■□□□□ 0.1
EFCAB3Q8N7B9 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
EFCAB3Q8N7B9 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
EFCAB3Q8N7B9 AL365209.1-201ENST00000624418 6473 ntBASIC15.67■□□□□ 0.1
EFCAB3Q8N7B9 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
EFCAB3Q8N7B9 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
EFCAB3Q8N7B9 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
EFCAB3Q8N7B9 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
EFCAB3Q8N7B9 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
EFCAB3Q8N7B9 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
EFCAB3Q8N7B9 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.66■□□□□ 0.1
EFCAB3Q8N7B9 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.66■□□□□ 0.1
EFCAB3Q8N7B9 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
EFCAB3Q8N7B9 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.66■□□□□ 0.1
EFCAB3Q8N7B9 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.66■□□□□ 0.1
EFCAB3Q8N7B9 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.66■□□□□ 0.1
EFCAB3Q8N7B9 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
EFCAB3Q8N7B9 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
EFCAB3Q8N7B9 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
EFCAB3Q8N7B9 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
EFCAB3Q8N7B9 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
EFCAB3Q8N7B9 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC15.66■□□□□ 0.1
EFCAB3Q8N7B9 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
EFCAB3Q8N7B9 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.66■□□□□ 0.1
EFCAB3Q8N7B9 KRT18P34-201ENST00000488218 1270 ntBASIC15.66■□□□□ 0.1
EFCAB3Q8N7B9 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.66■□□□□ 0.1
EFCAB3Q8N7B9 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.66■□□□□ 0.1
EFCAB3Q8N7B9 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
EFCAB3Q8N7B9 POLD4-211ENST00000539074 714 ntTSL 3 BASIC15.66■□□□□ 0.1
EFCAB3Q8N7B9 AC092718.5-201ENST00000562450 593 ntTSL 5 BASIC15.66■□□□□ 0.1
EFCAB3Q8N7B9 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.66■□□□□ 0.1
EFCAB3Q8N7B9 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC15.66■□□□□ 0.1
EFCAB3Q8N7B9 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.66■□□□□ 0.1
EFCAB3Q8N7B9 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC15.66■□□□□ 0.1
EFCAB3Q8N7B9 AC012645.4-201ENST00000610691 1061 ntBASIC15.66■□□□□ 0.1
EFCAB3Q8N7B9 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.66■□□□□ 0.1
EFCAB3Q8N7B9 AC012653.2-201ENST00000621880 420 ntBASIC15.66■□□□□ 0.1
EFCAB3Q8N7B9 AL161645.1-201ENST00000622716 1255 ntBASIC15.66■□□□□ 0.1
EFCAB3Q8N7B9 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
EFCAB3Q8N7B9 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
EFCAB3Q8N7B9 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.66■□□□□ 0.1
EFCAB3Q8N7B9 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
EFCAB3Q8N7B9 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.66■□□□□ 0.1
EFCAB3Q8N7B9 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.66■□□□□ 0.1
EFCAB3Q8N7B9 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
EFCAB3Q8N7B9 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
EFCAB3Q8N7B9 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.66■□□□□ 0.1
EFCAB3Q8N7B9 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
EFCAB3Q8N7B9 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
EFCAB3Q8N7B9 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms