Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 MAD2L1BP-201ENST00000372171 1301 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LTBP4Q8N2S1 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
LTBP4Q8N2S1 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LTBP4Q8N2S1 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC20.6■□□□□ 0.89
LTBP4Q8N2S1 KRT8P1-201ENST00000557533 1207 ntBASIC20.6■□□□□ 0.89
LTBP4Q8N2S1 INO80E-209ENST00000567254 625 ntTSL 2 BASIC20.6■□□□□ 0.89
LTBP4Q8N2S1 ANKRD26P1-203ENST00000569528 966 ntBASIC20.6■□□□□ 0.89
LTBP4Q8N2S1 NAT9-219ENST00000582524 573 ntTSL 4 BASIC20.6■□□□□ 0.89
LTBP4Q8N2S1 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LTBP4Q8N2S1 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC20.6■□□□□ 0.89
LTBP4Q8N2S1 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC20.6■□□□□ 0.89
LTBP4Q8N2S1 AL591424.3-201ENST00000614278 872 ntBASIC20.6■□□□□ 0.89
LTBP4Q8N2S1 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC20.6■□□□□ 0.89
LTBP4Q8N2S1 AL357143.1-203ENST00000639750 881 ntBASIC20.6■□□□□ 0.89
LTBP4Q8N2S1 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
LTBP4Q8N2S1 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LTBP4Q8N2S1 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
LTBP4Q8N2S1 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LTBP4Q8N2S1 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC20.6■□□□□ 0.89
LTBP4Q8N2S1 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
LTBP4Q8N2S1 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
LTBP4Q8N2S1 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC20.6■□□□□ 0.89
LTBP4Q8N2S1 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
LTBP4Q8N2S1 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC20.6■□□□□ 0.89
LTBP4Q8N2S1 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
LTBP4Q8N2S1 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
LTBP4Q8N2S1 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC20.6■□□□□ 0.89
LTBP4Q8N2S1 AC104961.1-201ENST00000427605 771 ntBASIC20.6■□□□□ 0.89
LTBP4Q8N2S1 CIDEC-205ENST00000443115 443 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LTBP4Q8N2S1 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC20.6■□□□□ 0.89
LTBP4Q8N2S1 AC003686.1-201ENST00000550956 1034 ntBASIC20.6■□□□□ 0.89
LTBP4Q8N2S1 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC20.6■□□□□ 0.89
LTBP4Q8N2S1 COX5A-205ENST00000568517 582 ntTSL 3 BASIC20.6■□□□□ 0.89
LTBP4Q8N2S1 AC006449.5-201ENST00000610658 2098 ntBASIC20.6■□□□□ 0.89
LTBP4Q8N2S1 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LTBP4Q8N2S1 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LTBP4Q8N2S1 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LTBP4Q8N2S1 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LTBP4Q8N2S1 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
LTBP4Q8N2S1 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
LTBP4Q8N2S1 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC20.59■□□□□ 0.89
LTBP4Q8N2S1 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LTBP4Q8N2S1 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC20.59■□□□□ 0.89
LTBP4Q8N2S1 WASH3P-207ENST00000560956 1394 ntBASIC20.59■□□□□ 0.89
LTBP4Q8N2S1 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LTBP4Q8N2S1 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LTBP4Q8N2S1 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LTBP4Q8N2S1 AC006328.1-201ENST00000437571 379 ntBASIC20.59■□□□□ 0.89
LTBP4Q8N2S1 AC098934.1-203ENST00000442868 1262 ntBASIC20.59■□□□□ 0.89
LTBP4Q8N2S1 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC20.59■□□□□ 0.89
LTBP4Q8N2S1 PFN2-212ENST00000490975 858 ntTSL 4 BASIC20.59■□□□□ 0.89
LTBP4Q8N2S1 AC011431.1-201ENST00000512971 230 ntBASIC20.59■□□□□ 0.89
LTBP4Q8N2S1 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LTBP4Q8N2S1 SRP14-208ENST00000560773 468 ntTSL 3 BASIC20.59■□□□□ 0.89
LTBP4Q8N2S1 EEF1DP7-201ENST00000580496 513 ntBASIC20.59■□□□□ 0.89
LTBP4Q8N2S1 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LTBP4Q8N2S1 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC20.59■□□□□ 0.89
LTBP4Q8N2S1 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC20.59■□□□□ 0.89
LTBP4Q8N2S1 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
LTBP4Q8N2S1 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.89
LTBP4Q8N2S1 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LTBP4Q8N2S1 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LTBP4Q8N2S1 TMEM60-201ENST00000257663 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LTBP4Q8N2S1 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LTBP4Q8N2S1 HNRNPA1P25-201ENST00000422644 937 ntBASIC20.58■□□□□ 0.89
LTBP4Q8N2S1 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LTBP4Q8N2S1 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC20.58■□□□□ 0.89
LTBP4Q8N2S1 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
LTBP4Q8N2S1 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LTBP4Q8N2S1 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
LTBP4Q8N2S1 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
LTBP4Q8N2S1 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
LTBP4Q8N2S1 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC20.58■□□□□ 0.88
LTBP4Q8N2S1 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
LTBP4Q8N2S1 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
LTBP4Q8N2S1 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC20.58■□□□□ 0.88
LTBP4Q8N2S1 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
LTBP4Q8N2S1 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LTBP4Q8N2S1 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LTBP4Q8N2S1 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LTBP4Q8N2S1 RNF216P1-203ENST00000404404 2427 ntBASIC20.57■□□□□ 0.88
LTBP4Q8N2S1 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC20.57■□□□□ 0.88
LTBP4Q8N2S1 BLVRA-201ENST00000265523 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LTBP4Q8N2S1 THYN1-203ENST00000392594 943 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LTBP4Q8N2S1 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LTBP4Q8N2S1 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
LTBP4Q8N2S1 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC20.57■□□□□ 0.88
LTBP4Q8N2S1 IFNWP2-201ENST00000431203 580 ntBASIC20.57■□□□□ 0.88
LTBP4Q8N2S1 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC20.57■□□□□ 0.88
LTBP4Q8N2S1 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC20.57■□□□□ 0.88
LTBP4Q8N2S1 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC20.57■□□□□ 0.88
LTBP4Q8N2S1 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC20.57■□□□□ 0.88
LTBP4Q8N2S1 RN7SL530P-201ENST00000485097 298 ntBASIC20.57■□□□□ 0.88
LTBP4Q8N2S1 AC008026.2-201ENST00000495438 348 ntBASIC20.57■□□□□ 0.88
LTBP4Q8N2S1 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.57■□□□□ 0.88
LTBP4Q8N2S1 PRKACA-208ENST00000589994 1127 ntTSL 2 BASIC20.57■□□□□ 0.88
LTBP4Q8N2S1 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LTBP4Q8N2S1 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC20.57■□□□□ 0.88
LTBP4Q8N2S1 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LTBP4Q8N2S1 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms