Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00346Q8IVM7 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.74□□□□□ -0.21
LINC00346Q8IVM7 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00346Q8IVM7 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.74□□□□□ -0.21
LINC00346Q8IVM7 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00346Q8IVM7 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00346Q8IVM7 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
LINC00346Q8IVM7 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00346Q8IVM7 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
LINC00346Q8IVM7 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00346Q8IVM7 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00346Q8IVM7 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00346Q8IVM7 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00346Q8IVM7 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00346Q8IVM7 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00346Q8IVM7 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
LINC00346Q8IVM7 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.74□□□□□ -0.21
LINC00346Q8IVM7 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.74□□□□□ -0.21
LINC00346Q8IVM7 RN7SL618P-201ENST00000477850 296 ntBASIC13.74□□□□□ -0.21
LINC00346Q8IVM7 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC13.74□□□□□ -0.21
LINC00346Q8IVM7 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC13.74□□□□□ -0.21
LINC00346Q8IVM7 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
LINC00346Q8IVM7 LINC01115-203ENST00000606068 577 ntBASIC13.74□□□□□ -0.21
LINC00346Q8IVM7 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00346Q8IVM7 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00346Q8IVM7 AC079781.4-201ENST00000641908 219 ntBASIC13.74□□□□□ -0.21
LINC00346Q8IVM7 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.74□□□□□ -0.21
LINC00346Q8IVM7 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00346Q8IVM7 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.74□□□□□ -0.21
LINC00346Q8IVM7 Z97205.2-201ENST00000564697 1639 ntBASIC13.74□□□□□ -0.21
LINC00346Q8IVM7 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.74□□□□□ -0.21
LINC00346Q8IVM7 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00346Q8IVM7 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00346Q8IVM7 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00346Q8IVM7 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00346Q8IVM7 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00346Q8IVM7 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00346Q8IVM7 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
LINC00346Q8IVM7 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00346Q8IVM7 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00346Q8IVM7 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.74□□□□□ -0.21
LINC00346Q8IVM7 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00346Q8IVM7 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00346Q8IVM7 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00346Q8IVM7 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00346Q8IVM7 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC00346Q8IVM7 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
LINC00346Q8IVM7 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00346Q8IVM7 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.73□□□□□ -0.21
LINC00346Q8IVM7 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00346Q8IVM7 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00346Q8IVM7 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.73□□□□□ -0.21
LINC00346Q8IVM7 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.73□□□□□ -0.21
LINC00346Q8IVM7 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00346Q8IVM7 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00346Q8IVM7 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00346Q8IVM7 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00346Q8IVM7 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00346Q8IVM7 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
LINC00346Q8IVM7 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00346Q8IVM7 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00346Q8IVM7 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
LINC00346Q8IVM7 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
LINC00346Q8IVM7 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00346Q8IVM7 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.73□□□□□ -0.21
LINC00346Q8IVM7 RPL5P21-201ENST00000404620 815 ntBASIC13.73□□□□□ -0.21
LINC00346Q8IVM7 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.73□□□□□ -0.21
LINC00346Q8IVM7 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC13.73□□□□□ -0.21
LINC00346Q8IVM7 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC13.73□□□□□ -0.21
LINC00346Q8IVM7 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC13.73□□□□□ -0.21
LINC00346Q8IVM7 KLF2P3-201ENST00000451977 1087 ntBASIC13.73□□□□□ -0.21
LINC00346Q8IVM7 HLA-V-204ENST00000476601 1289 ntBASIC13.73□□□□□ -0.21
LINC00346Q8IVM7 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00346Q8IVM7 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.73□□□□□ -0.21
LINC00346Q8IVM7 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00346Q8IVM7 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC13.73□□□□□ -0.21
LINC00346Q8IVM7 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.73□□□□□ -0.21
LINC00346Q8IVM7 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00346Q8IVM7 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.73□□□□□ -0.21
LINC00346Q8IVM7 AC073592.8-201ENST00000624126 511 ntBASIC13.73□□□□□ -0.21
LINC00346Q8IVM7 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.73□□□□□ -0.21
LINC00346Q8IVM7 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.73□□□□□ -0.21
LINC00346Q8IVM7 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00346Q8IVM7 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00346Q8IVM7 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00346Q8IVM7 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00346Q8IVM7 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.73□□□□□ -0.21
LINC00346Q8IVM7 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.73□□□□□ -0.21
LINC00346Q8IVM7 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00346Q8IVM7 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
LINC00346Q8IVM7 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00346Q8IVM7 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.73□□□□□ -0.21
LINC00346Q8IVM7 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
LINC00346Q8IVM7 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00346Q8IVM7 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00346Q8IVM7 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.73□□□□□ -0.21
LINC00346Q8IVM7 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.73□□□□□ -0.21
LINC00346Q8IVM7 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC00346Q8IVM7 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.73□□□□□ -0.21
LINC00346Q8IVM7 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms