Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
RFX6Q8HWS3 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFX6Q8HWS3 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.13■□□□□ 0.17
RFX6Q8HWS3 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFX6Q8HWS3 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFX6Q8HWS3 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RFX6Q8HWS3 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RFX6Q8HWS3 TREML5P-201ENST00000421694 576 ntBASIC16.13■□□□□ 0.17
RFX6Q8HWS3 RPL13P2-201ENST00000440687 659 ntBASIC16.13■□□□□ 0.17
RFX6Q8HWS3 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.13■□□□□ 0.17
RFX6Q8HWS3 FAM86GP-201ENST00000448322 971 ntBASIC16.13■□□□□ 0.17
RFX6Q8HWS3 AC067863.1-201ENST00000494933 530 ntBASIC16.13■□□□□ 0.17
RFX6Q8HWS3 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.13■□□□□ 0.17
RFX6Q8HWS3 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.13■□□□□ 0.17
RFX6Q8HWS3 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFX6Q8HWS3 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.13■□□□□ 0.17
RFX6Q8HWS3 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFX6Q8HWS3 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.13■□□□□ 0.17
RFX6Q8HWS3 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFX6Q8HWS3 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
RFX6Q8HWS3 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFX6Q8HWS3 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
RFX6Q8HWS3 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RFX6Q8HWS3 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFX6Q8HWS3 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
RFX6Q8HWS3 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFX6Q8HWS3 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFX6Q8HWS3 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RFX6Q8HWS3 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFX6Q8HWS3 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.13■□□□□ 0.17
RFX6Q8HWS3 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.13■□□□□ 0.17
RFX6Q8HWS3 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFX6Q8HWS3 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFX6Q8HWS3 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFX6Q8HWS3 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFX6Q8HWS3 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
RFX6Q8HWS3 CICP24-201ENST00000605464 2705 ntBASIC16.12■□□□□ 0.17
RFX6Q8HWS3 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFX6Q8HWS3 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RFX6Q8HWS3 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFX6Q8HWS3 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RFX6Q8HWS3 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFX6Q8HWS3 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFX6Q8HWS3 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
RFX6Q8HWS3 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFX6Q8HWS3 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFX6Q8HWS3 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFX6Q8HWS3 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
RFX6Q8HWS3 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
RFX6Q8HWS3 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFX6Q8HWS3 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFX6Q8HWS3 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
RFX6Q8HWS3 AL133267.1-201ENST00000398220 340 ntBASIC16.12■□□□□ 0.17
RFX6Q8HWS3 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.12■□□□□ 0.17
RFX6Q8HWS3 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
RFX6Q8HWS3 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.12■□□□□ 0.17
RFX6Q8HWS3 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RFX6Q8HWS3 SDHAP3-202ENST00000515467 728 ntBASIC16.12■□□□□ 0.17
RFX6Q8HWS3 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.12■□□□□ 0.17
RFX6Q8HWS3 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.12■□□□□ 0.17
RFX6Q8HWS3 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.12■□□□□ 0.17
RFX6Q8HWS3 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.12■□□□□ 0.17
RFX6Q8HWS3 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.12■□□□□ 0.17
RFX6Q8HWS3 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.12■□□□□ 0.17
RFX6Q8HWS3 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.12■□□□□ 0.17
RFX6Q8HWS3 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.12■□□□□ 0.17
RFX6Q8HWS3 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RFX6Q8HWS3 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RFX6Q8HWS3 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFX6Q8HWS3 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.12■□□□□ 0.17
RFX6Q8HWS3 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFX6Q8HWS3 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFX6Q8HWS3 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFX6Q8HWS3 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
RFX6Q8HWS3 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFX6Q8HWS3 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.12■□□□□ 0.17
RFX6Q8HWS3 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
RFX6Q8HWS3 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.12■□□□□ 0.17
RFX6Q8HWS3 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFX6Q8HWS3 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFX6Q8HWS3 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFX6Q8HWS3 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.12■□□□□ 0.17
RFX6Q8HWS3 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
RFX6Q8HWS3 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFX6Q8HWS3 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RFX6Q8HWS3 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
RFX6Q8HWS3 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RFX6Q8HWS3 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RFX6Q8HWS3 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RFX6Q8HWS3 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
RFX6Q8HWS3 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RFX6Q8HWS3 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RFX6Q8HWS3 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RFX6Q8HWS3 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RFX6Q8HWS3 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
RFX6Q8HWS3 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RFX6Q8HWS3 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC16.11■□□□□ 0.17
RFX6Q8HWS3 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.11■□□□□ 0.17
RFX6Q8HWS3 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.11■□□□□ 0.17
RFX6Q8HWS3 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms