Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.06□□□□□ -0.16
SHFQ7M4L6 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHFQ7M4L6 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SHFQ7M4L6 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.06□□□□□ -0.16
SHFQ7M4L6 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.06□□□□□ -0.16
SHFQ7M4L6 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHFQ7M4L6 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.06□□□□□ -0.16
SHFQ7M4L6 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHFQ7M4L6 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHFQ7M4L6 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SHFQ7M4L6 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SHFQ7M4L6 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHFQ7M4L6 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.06□□□□□ -0.16
SHFQ7M4L6 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHFQ7M4L6 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHFQ7M4L6 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHFQ7M4L6 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.05□□□□□ -0.16
SHFQ7M4L6 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.05□□□□□ -0.16
SHFQ7M4L6 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHFQ7M4L6 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SHFQ7M4L6 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHFQ7M4L6 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.05□□□□□ -0.16
SHFQ7M4L6 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHFQ7M4L6 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHFQ7M4L6 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.05□□□□□ -0.16
SHFQ7M4L6 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
SHFQ7M4L6 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHFQ7M4L6 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHFQ7M4L6 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SHFQ7M4L6 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.05□□□□□ -0.16
SHFQ7M4L6 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHFQ7M4L6 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHFQ7M4L6 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.05□□□□□ -0.16
SHFQ7M4L6 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.05□□□□□ -0.16
SHFQ7M4L6 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.05□□□□□ -0.16
SHFQ7M4L6 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.05□□□□□ -0.16
SHFQ7M4L6 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SHFQ7M4L6 SLC25A1P1-201ENST00000528351 927 ntBASIC14.05□□□□□ -0.16
SHFQ7M4L6 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.05□□□□□ -0.16
SHFQ7M4L6 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.05□□□□□ -0.16
SHFQ7M4L6 AC040169.1-201ENST00000565382 521 ntBASIC14.05□□□□□ -0.16
SHFQ7M4L6 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHFQ7M4L6 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.05□□□□□ -0.16
SHFQ7M4L6 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.05□□□□□ -0.16
SHFQ7M4L6 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHFQ7M4L6 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.05□□□□□ -0.16
SHFQ7M4L6 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
SHFQ7M4L6 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHFQ7M4L6 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.05□□□□□ -0.16
SHFQ7M4L6 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SHFQ7M4L6 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHFQ7M4L6 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.05□□□□□ -0.16
SHFQ7M4L6 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SHFQ7M4L6 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
SHFQ7M4L6 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.05□□□□□ -0.16
SHFQ7M4L6 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.05□□□□□ -0.16
SHFQ7M4L6 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
SHFQ7M4L6 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHFQ7M4L6 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHFQ7M4L6 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHFQ7M4L6 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.04□□□□□ -0.16
SHFQ7M4L6 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.04□□□□□ -0.16
SHFQ7M4L6 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
SHFQ7M4L6 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHFQ7M4L6 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SHFQ7M4L6 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHFQ7M4L6 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.04□□□□□ -0.16
SHFQ7M4L6 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SHFQ7M4L6 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHFQ7M4L6 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHFQ7M4L6 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.04□□□□□ -0.16
SHFQ7M4L6 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHFQ7M4L6 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHFQ7M4L6 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHFQ7M4L6 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC14.04□□□□□ -0.16
SHFQ7M4L6 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC14.04□□□□□ -0.16
SHFQ7M4L6 ADH5P3-201ENST00000433842 1137 ntBASIC14.04□□□□□ -0.16
SHFQ7M4L6 SPCS2P4-201ENST00000436160 681 ntBASIC14.04□□□□□ -0.16
SHFQ7M4L6 EEF1DP4-201ENST00000446006 880 ntBASIC14.04□□□□□ -0.16
SHFQ7M4L6 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.04□□□□□ -0.16
SHFQ7M4L6 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.04□□□□□ -0.16
SHFQ7M4L6 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC14.04□□□□□ -0.16
SHFQ7M4L6 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.04□□□□□ -0.16
SHFQ7M4L6 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.04□□□□□ -0.16
SHFQ7M4L6 AC097359.3-201ENST00000603982 1210 ntBASIC14.04□□□□□ -0.16
SHFQ7M4L6 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.04□□□□□ -0.16
SHFQ7M4L6 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHFQ7M4L6 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
SHFQ7M4L6 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SHFQ7M4L6 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
SHFQ7M4L6 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.04□□□□□ -0.16
SHFQ7M4L6 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SHFQ7M4L6 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.04□□□□□ -0.16
SHFQ7M4L6 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHFQ7M4L6 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHFQ7M4L6 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SHFQ7M4L6 AL607033.1-201ENST00000623900 1599 ntBASIC14.04□□□□□ -0.16
SHFQ7M4L6 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.04□□□□□ -0.16
SHFQ7M4L6 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHFQ7M4L6 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms